JALVIEW_ANNOTATION # Created by concise2jalview using 'jp_U3PmiCD.concise' as input NO_GRAPH Lupas_21 Coiled-coil prediction windowed over 21 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_14 Coiled-coil prediction windowed over 14 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH Lupas_28 Coiled-coil prediction windowed over 28 residues -|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH jnetpred Final secondary structure prediction by Jnet ||||||||||||E|E|E|E|E|E|E|||||H|H|H|H|H|||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||E|E|E|E|||||E|E|E|E|E|E|||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||||E|E|E|E|E|E||||E|E|E|E|E|E|||||||||E|E|||||H|H|H|H|H|H|H|H|H|||||||E|E|E||H|H|H|H|H|H|H|H|H|||||||E|E|E|E||||E|E|E|E||||||E|E|E|E|E|E|E|||||||||||||||||| BAR_GRAPH JNETCONF Confidence of Jnet prediction 0 (low) -> 9 (high) 8|9|8|8|7|7|7|7|7|7|7|4|4|8|8|8|8|8|4|3|7|8|6|1|5|5|5|4|1|3|6|8|9|9|9|9|9|9|9|9|9|8|8|6|1|3|4|1|0|1|2|5|7|5|1|5|6|2|0|8|8|5|3|7|8|8|7|5|3|6|8|7|5|3|0|2|9|9|9|9|9|9|9|9|9|8|6|1|2|1|1|1|1|4|4|3|3|2|2|4|5|3|1|3|2|1|1|1|1|2|0|1|3|8|8|9|8|7|5|4|3|1|3|4|0|2|5|7|7|7|5|1|6|7|7|1|1|1|8|1|2|6|8|8|6|1|4|7|7|7|7|6|7|1|0|0|0|2|6|5|2|7|8|9|9|9|8|8|5|1|6|8|8|8|5|1|2|0|3|5|8|8|9|9|8|7|6|0|4|7|8|8|6|1|7|8|8|4|4|7|4|6|8|7|1|5|7|8|8|4|5|8|8|9|8|8|1|3|6|7|7|7|7|6|6|7|7|7|7|7|7|7|8|8|9 NO_GRAPH JNETSOL25 Jnet solvent relative accessibility prediction at 25% cut-off -|-|-|-|B|-|-|-|-|-|-|-|B|B|B|B|B|B|B|B|B|-|B|B|-|B|B|-|-|B|B|-|-|B|B|-|B|B|-|-|B|B|-|B|B|B|-|B|B|-|-|B|-|B|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|-|-|-|B|B|-|-|B|B|-|B|B|B|-|B|B|-|B|B|-|-|B|-|-|-|B|B|-|B|B|B|-|B|B|-|B|B|B|-|B|B|-|-|B|B|-|B|B|-|-|B|-|-|-|-|-|-|-|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|B|-|-|-|B|-|B|B|B|B|-|-|B|B|B|B|B|B|B|B|B|-|B|B|-|-|B|B|B|B|B|B|B|B|B|B|-|B|B|-|-|-|-|-|-|-|B|-|B|-|-|-|-|-|B|-|B|-|-|B|-|-|-|B|-|B|B|B|B|-|B|-|-|-|-|-|B|-|-|B|-|-|-|-|-|-|B|- NO_GRAPH JNETSOL5 Jnet solvent relative accessibility prediction at 5% cut-off -|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|B|B|B|B|-|-|-|-|-|B|B|-|-|-|-|-|-|B|B|-|B|B|-|-|B|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|B|B|-|-|-|-|-|-|-|-|-|B|-|-|B|B|-|B|B|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|B|-|B|B|B|-|-|B|-|B|B|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|-|B|-|-|-|-|-|-|-|-|B|B|B|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|B|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETSOL0 Jnet solvent relative accessibility prediction at 0% cut-off -|-|-|-|-|-|-|-|-|-|-|-|-|B|B|B|B|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|B|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|B|B|-|B|B|B|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|B|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|-|- NO_GRAPH JNETHMM Jnet prediction using HMMer profiles ||||||||||||E|E|E|E|E|E|E|||||H|H|H|H|H|||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||E|E|E|E|E||||E|E|E|E|E|E|||||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|H||||||||E|E|E|E|E|E|E||E|E|E|E|E|E|E||||||||E|E|E|E|E|||H|H|H|H|H|H|H|H|H|||||||E|E|E||H|H|H|H|H|H|H|H||||||||E|E|E|E||||E|E|E|||||||E|E|E|E|E|E||||||||||||||||||| NO_GRAPH JNETPSSM Jnet prediction using PSSM profiles ||||||||||||E|E|E|E|E|E|E|||||H|H|H|H|H|||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||H|H|H|E||||E|E|E|E|||||E|E|E|E|E|E||||||H|H|H|H|H|H|H|H|H|H|H|H|H|H|H|||||H|H|H|H|H|H|H|H|H|H|H||||||||H|H|H|H|H|H|H|H|H|||H|H|H|H|||||||E|E|E|E|E||||||E|E|E|E|E||||||||||||||||H|H|H|H|H|H|H|H|||||||E|E|||H|H|H|H|H|H|H|H|H||||||E|E|E|E|E||||E|E|E|E||||||E|E|E|E|E|E|E|||||||||||||||||| NO_GRAPH JNETJURY Positions where Jnet predictions do not agree | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |*|*| | | |*| | | | | | | |*| | | | | | | | | | | | | | |*|*|*| | | | | | | | | | | | |*|*|*|*| | | | | | | | | | | |*|*|*|*|*|*|*| | | | | | | | | |*|*| | | |*| | | | | | | | | | | |*|*| |*|*| | | | | | | | | | | | |*|*|*|*|*| | |*| | | | | | | | | | | | | | | | |*| | | | | | | | | |*| | | | | |*| | | | | | | | | | |*| | | | | | | | | | | |*| | | | | | | | | | | | | | | | | |