QUERY                  : AETVESCLAKSHTENSFTNVWKDDKTLDRYANYEGCLWNATGVVVCTGDETQCYGTWVPIGLAIP : QUERY 
UniRef90_UPI00046677C8 : -TPEEVCQTKQPEDGVFNNVF--SDSGNRYINYDGCEYEATGVIVCQSDGTVCAATWKPTG---- : UniRef90_UPI00046677C8
UniRef90_A0A017KQQ0    : -TPEEICEAKPPEEGVFNNVYSYD--GDRYIYYNGCEYEATGVIVCQSDSTVCAATWKPTGVAAP : UniRef90_A0A017KQQ0
UniRef90_P15415        : -TPEEICEAKPPIDGVFNNVSK-GDEGGFYINYNGCEYEATGVTVCQNDGTVCASSWKPTG---- : UniRef90_P15415
UniRef90_A7ZLV9        : -ESDEACISRPALQGSLSGAFRSDNTW--YAVVDGCIYMATGVIVGSETGDVAATNWIPVAAYEP : UniRef90_A7ZLV9
UniRef90_O80297        : ATTDAECLSKPAFDGTLSNVWKEGDS--RYANFENCIYELSGIGIGYDNDTSCNGHWTPVRAA-- : UniRef90_O80297
UniRef90_UPI00046F6778 : -TPEEVCEASPPISNTFNNV------SDGYINYNGCEYEATGVIVCNNAKTVCAATWKPTG-YVP : UniRef90_UPI00046F6778
UniRef90_N2RJA3        : -EADEVCISRPTLNFTLSGAFRSDNTW--YAILDGCIYEATGNVIVGGDSGIVSANWIPVAAYEP : UniRef90_N2RJA3
UniRef90_A0A029IM18    : --TDEICLSRPVLDGTFSDVYK-GDDGTRYVNVQGCIYEATGPLICNDDDTVCTADWKPVAV--- : UniRef90_A0A029IM18
UniRef90_UPI0003689F5A : --------------GVFNNV--DSYDGGRYIYYNGCEYEATGVIVCQGDGTVCAATWKPTGAADP : UniRef90_UPI0003689F5A
UniRef90_UPI00041B6D45 : -TPEEVCMNKSSISGSF---YTKKVGSNYYANVDGCEYIANDVLLCGEKSGTCYAKWNPTGKTV- : UniRef90_UPI00041B6D45
UniRef90_D2U3R6        : ---EKDCLAKPIEAKTYSNTYKIG--SDYYVNFEGCQYIAKGVIVGGGDGTI-AADWKPTGKVV- : UniRef90_D2U3R6
UniRef90_K8VZ46        : ---ENYCKSQPVLKNSFSPARKDS-SGNYVANYEGCKYESTSIGVIVGDRI--AADWRPVGVADP : UniRef90_K8VZ46
UniRef90_UPI0004719E0F : -----------------------------YINYNGCEYEATGVIVCNNAKTVCAATWKPTG-YVP : UniRef90_UPI0004719E0F
UniRef90_G2BPM7        : -----------------------DDKGNKYVTIHGCIYEATGVISCSNDSTHCSATWKPLTV--- : UniRef90_G2BPM7

                       : 1---------11--------21--------31--------41--------51--------61--- :
OrigSeq                : AETVESCLAKSHTENSFTNVWKDDKTLDRYANYEGCLWNATGVVVCTGDETQCYGTWVPIGLAIP : OrigSeq

Jnet                   : ---HHHHH------------EEE-----EEEEE---EEEE--EEEEE---EEEEE--EEEEEE-- : Jnet
jhmm                   : ---HHHHH------------EEE-----EEEEE---EEEE--EEEEE---EEEEEEEEEEEEE-- : jhmm
jpssm                  : ---HHHHH--------E---EEE-----EEEEEE--EEEE--EEEEE----EEE---EEEEEE-- : jpssm

Lupas 14               : ----------------------------------------------------------------- : Lupas 14
Lupas 21               : ----------------------------------------------------------------- : Lupas 21
Lupas 28               : ----------------------------------------------------------------- : Lupas 28

Jnet_25                : ------B---B-B--BBB-BB-----B-BBBBB-BB-B-B-BBBBB------B-B-B-BB-BB-- : Jnet_25
Jnet_5                 : ------B------------B---------BB-B--B---B---BBB------B-B-B-B------ : Jnet_5
Jnet_0                 : ------B-----------------------B-------------BB------------------- : Jnet_0
Jnet Rel               : 98466541367777513352462478846999804468863458996477166203058998379 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.