SILENT_MODE BLOCK_FILE jp_xriPrSU.concise.blc MAX_NSEQ 621 MAX_INPUT_LEN 623 OUTPUT_FILE jp_xriPrSU.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 131 610 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 611 131 620 H SPACE SUB_CHARS 1 611 131 620 E SPACE SUB_CHARS 1 611 131 620 - SPACE STRAND 24 614 29 COLOUR_TEXT_REGION 24 614 29 614 51 STRAND 48 614 52 COLOUR_TEXT_REGION 48 614 52 614 51 STRAND 76 614 81 COLOUR_TEXT_REGION 76 614 81 614 51 STRAND 100 614 102 COLOUR_TEXT_REGION 100 614 102 614 51 HELIX 2 614 14 COLOUR_TEXT_REGION 2 614 14 614 50 HELIX 34 614 44 COLOUR_TEXT_REGION 34 614 44 614 50 HELIX 61 614 68 COLOUR_TEXT_REGION 61 614 68 614 50 HELIX 87 614 95 COLOUR_TEXT_REGION 87 614 95 614 50 HELIX 104 614 129 COLOUR_TEXT_REGION 104 614 129 614 50 STRAND 22 619 29 COLOUR_TEXT_REGION 22 619 29 619 51 STRAND 49 619 51 COLOUR_TEXT_REGION 49 619 51 619 51 STRAND 76 619 81 COLOUR_TEXT_REGION 76 619 81 619 51 STRAND 100 619 102 COLOUR_TEXT_REGION 100 619 102 619 51 HELIX 2 619 14 COLOUR_TEXT_REGION 2 619 14 619 50 HELIX 33 619 44 COLOUR_TEXT_REGION 33 619 44 619 50 HELIX 59 619 68 COLOUR_TEXT_REGION 59 619 68 619 50 HELIX 87 619 95 COLOUR_TEXT_REGION 87 619 95 619 50 HELIX 105 619 120 COLOUR_TEXT_REGION 105 619 120 619 50 HELIX 124 619 128 COLOUR_TEXT_REGION 124 619 128 619 50 STRAND 24 620 29 COLOUR_TEXT_REGION 24 620 29 620 51 STRAND 48 620 53 COLOUR_TEXT_REGION 48 620 53 620 51 STRAND 75 620 81 COLOUR_TEXT_REGION 75 620 81 620 51 STRAND 100 620 102 COLOUR_TEXT_REGION 100 620 102 620 51 HELIX 3 620 14 COLOUR_TEXT_REGION 3 620 14 620 50 HELIX 34 620 44 COLOUR_TEXT_REGION 34 620 44 620 50 HELIX 62 620 68 COLOUR_TEXT_REGION 62 620 68 620 50 HELIX 87 620 95 COLOUR_TEXT_REGION 87 620 95 620 50 HELIX 103 620 129 COLOUR_TEXT_REGION 103 620 129 620 50