SILENT_MODE BLOCK_FILE jp_fDmWRH8.concise.blc MAX_NSEQ 722 MAX_INPUT_LEN 724 OUTPUT_FILE jp_fDmWRH8.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 182 711 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 712 182 721 H SPACE SUB_CHARS 1 712 182 721 E SPACE SUB_CHARS 1 712 182 721 - SPACE STRAND 140 715 141 COLOUR_TEXT_REGION 140 715 141 715 51 HELIX 10 715 16 COLOUR_TEXT_REGION 10 715 16 715 50 HELIX 22 715 28 COLOUR_TEXT_REGION 22 715 28 715 50 HELIX 51 715 55 COLOUR_TEXT_REGION 51 715 55 715 50 HELIX 68 715 76 COLOUR_TEXT_REGION 68 715 76 715 50 HELIX 96 715 105 COLOUR_TEXT_REGION 96 715 105 715 50 HELIX 108 715 118 COLOUR_TEXT_REGION 108 715 118 715 50 HELIX 151 715 164 COLOUR_TEXT_REGION 151 715 164 715 50 STRAND 125 720 128 COLOUR_TEXT_REGION 125 720 128 720 51 STRAND 140 720 141 COLOUR_TEXT_REGION 140 720 141 720 51 HELIX 11 720 16 COLOUR_TEXT_REGION 11 720 16 720 50 HELIX 23 720 28 COLOUR_TEXT_REGION 23 720 28 720 50 HELIX 51 720 55 COLOUR_TEXT_REGION 51 720 55 720 50 HELIX 68 720 75 COLOUR_TEXT_REGION 68 720 75 720 50 HELIX 96 720 105 COLOUR_TEXT_REGION 96 720 105 720 50 HELIX 108 720 117 COLOUR_TEXT_REGION 108 720 117 720 50 HELIX 151 720 164 COLOUR_TEXT_REGION 151 720 164 720 50 STRAND 140 721 140 COLOUR_TEXT_REGION 140 721 140 721 51 HELIX 9 721 16 COLOUR_TEXT_REGION 9 721 16 721 50 HELIX 19 721 28 COLOUR_TEXT_REGION 19 721 28 721 50 HELIX 51 721 56 COLOUR_TEXT_REGION 51 721 56 721 50 HELIX 68 721 78 COLOUR_TEXT_REGION 68 721 78 721 50 HELIX 96 721 105 COLOUR_TEXT_REGION 96 721 105 721 50 HELIX 108 721 118 COLOUR_TEXT_REGION 108 721 118 721 50 HELIX 122 721 125 COLOUR_TEXT_REGION 122 721 125 721 50 HELIX 139 721 139 COLOUR_TEXT_REGION 139 721 139 721 50 HELIX 141 721 141 COLOUR_TEXT_REGION 141 721 141 721 50 HELIX 150 721 164 COLOUR_TEXT_REGION 150 721 164 721 50