SILENT_MODE BLOCK_FILE jp_2b7T55o.concise.blc MAX_NSEQ 938 MAX_INPUT_LEN 940 OUTPUT_FILE jp_2b7T55o.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 88 927 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 928 88 937 H SPACE SUB_CHARS 1 928 88 937 E SPACE SUB_CHARS 1 928 88 937 - SPACE STRAND 4 931 17 COLOUR_TEXT_REGION 4 931 17 931 51 STRAND 34 931 38 COLOUR_TEXT_REGION 34 931 38 931 51 STRAND 43 931 48 COLOUR_TEXT_REGION 43 931 48 931 51 STRAND 67 931 76 COLOUR_TEXT_REGION 67 931 76 931 51 STRAND 85 931 87 COLOUR_TEXT_REGION 85 931 87 931 51 HELIX 20 931 29 COLOUR_TEXT_REGION 20 931 29 931 50 HELIX 51 931 60 COLOUR_TEXT_REGION 51 931 60 931 50 STRAND 4 936 14 COLOUR_TEXT_REGION 4 936 14 936 51 STRAND 34 936 38 COLOUR_TEXT_REGION 34 936 38 936 51 STRAND 43 936 49 COLOUR_TEXT_REGION 43 936 49 936 51 STRAND 67 936 75 COLOUR_TEXT_REGION 67 936 75 936 51 STRAND 85 936 87 COLOUR_TEXT_REGION 85 936 87 936 51 HELIX 20 936 29 COLOUR_TEXT_REGION 20 936 29 936 50 HELIX 51 936 60 COLOUR_TEXT_REGION 51 936 60 936 50 STRAND 4 937 18 COLOUR_TEXT_REGION 4 937 18 937 51 STRAND 34 937 38 COLOUR_TEXT_REGION 34 937 38 937 51 STRAND 43 937 48 COLOUR_TEXT_REGION 43 937 48 937 51 STRAND 67 937 76 COLOUR_TEXT_REGION 67 937 76 937 51 STRAND 85 937 87 COLOUR_TEXT_REGION 85 937 87 937 51 HELIX 21 937 29 COLOUR_TEXT_REGION 21 937 29 937 50 HELIX 51 937 60 COLOUR_TEXT_REGION 51 937 60 937 50