SILENT_MODE BLOCK_FILE jp_kMxlbgG.concise.blc MAX_NSEQ 506 MAX_INPUT_LEN 508 OUTPUT_FILE jp_kMxlbgG.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 759 495 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 496 759 505 H SPACE SUB_CHARS 1 496 759 505 E SPACE SUB_CHARS 1 496 759 505 - SPACE STRAND 95 499 99 COLOUR_TEXT_REGION 95 499 99 499 51 STRAND 109 499 110 COLOUR_TEXT_REGION 109 499 110 499 51 STRAND 166 499 166 COLOUR_TEXT_REGION 166 499 166 499 51 STRAND 177 499 177 COLOUR_TEXT_REGION 177 499 177 499 51 STRAND 334 499 341 COLOUR_TEXT_REGION 334 499 341 499 51 STRAND 371 499 375 COLOUR_TEXT_REGION 371 499 375 499 51 STRAND 397 499 400 COLOUR_TEXT_REGION 397 499 400 499 51 STRAND 416 499 421 COLOUR_TEXT_REGION 416 499 421 499 51 STRAND 457 499 458 COLOUR_TEXT_REGION 457 499 458 499 51 STRAND 598 499 603 COLOUR_TEXT_REGION 598 499 603 499 51 STRAND 704 499 709 COLOUR_TEXT_REGION 704 499 709 499 51 STRAND 728 499 733 COLOUR_TEXT_REGION 728 499 733 499 51 STRAND 736 499 740 COLOUR_TEXT_REGION 736 499 740 499 51 HELIX 5 499 11 COLOUR_TEXT_REGION 5 499 11 499 50 HELIX 25 499 31 COLOUR_TEXT_REGION 25 499 31 499 50 HELIX 48 499 66 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504 503 COLOUR_TEXT_REGION 495 504 503 504 50 HELIX 509 504 512 COLOUR_TEXT_REGION 509 504 512 504 50 HELIX 529 504 546 COLOUR_TEXT_REGION 529 504 546 504 50 HELIX 548 504 557 COLOUR_TEXT_REGION 548 504 557 504 50 HELIX 571 504 589 COLOUR_TEXT_REGION 571 504 589 504 50 HELIX 609 504 613 COLOUR_TEXT_REGION 609 504 613 504 50 HELIX 644 504 652 COLOUR_TEXT_REGION 644 504 652 504 50 HELIX 681 504 699 COLOUR_TEXT_REGION 681 504 699 504 50 HELIX 712 504 720 COLOUR_TEXT_REGION 712 504 720 504 50 HELIX 744 504 756 COLOUR_TEXT_REGION 744 504 756 504 50 STRAND 95 505 100 COLOUR_TEXT_REGION 95 505 100 505 51 STRAND 108 505 111 COLOUR_TEXT_REGION 108 505 111 505 51 STRAND 176 505 177 COLOUR_TEXT_REGION 176 505 177 505 51 STRAND 325 505 327 COLOUR_TEXT_REGION 325 505 327 505 51 STRAND 334 505 341 COLOUR_TEXT_REGION 334 505 341 505 51 STRAND 371 505 375 COLOUR_TEXT_REGION 371 505 375 505 51 STRAND 398 505 399 COLOUR_TEXT_REGION 398 505 399 505 51 STRAND 415 505 422 COLOUR_TEXT_REGION 415 505 422 505 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