SILENT_MODE BLOCK_FILE jp_dZYTM4z.concise.blc MAX_NSEQ 247 MAX_INPUT_LEN 249 OUTPUT_FILE jp_dZYTM4z.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 279 236 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 237 279 246 H SPACE SUB_CHARS 1 237 279 246 E SPACE SUB_CHARS 1 237 279 246 - SPACE STRAND 13 240 17 COLOUR_TEXT_REGION 13 240 17 240 51 STRAND 143 240 143 COLOUR_TEXT_REGION 143 240 143 240 51 STRAND 160 240 164 COLOUR_TEXT_REGION 160 240 164 240 51 STRAND 172 240 177 COLOUR_TEXT_REGION 172 240 177 240 51 HELIX 33 240 46 COLOUR_TEXT_REGION 33 240 46 240 50 HELIX 48 240 53 COLOUR_TEXT_REGION 48 240 53 240 50 HELIX 74 240 88 COLOUR_TEXT_REGION 74 240 88 240 50 HELIX 100 240 103 COLOUR_TEXT_REGION 100 240 103 240 50 HELIX 142 240 142 COLOUR_TEXT_REGION 142 240 142 240 50 HELIX 233 240 243 COLOUR_TEXT_REGION 233 240 243 240 50 HELIX 255 240 261 COLOUR_TEXT_REGION 255 240 261 240 50 HELIX 264 240 268 COLOUR_TEXT_REGION 264 240 268 240 50 STRAND 12 245 16 COLOUR_TEXT_REGION 12 245 16 245 51 STRAND 112 245 112 COLOUR_TEXT_REGION 112 245 112 245 51 STRAND 120 245 122 COLOUR_TEXT_REGION 120 245 122 245 51 STRAND 142 245 143 COLOUR_TEXT_REGION 142 245 143 245 51 STRAND 171 245 177 COLOUR_TEXT_REGION 171 245 177 245 51 STRAND 210 245 211 COLOUR_TEXT_REGION 210 245 211 245 51 STRAND 276 245 277 COLOUR_TEXT_REGION 276 245 277 245 51 HELIX 17 245 22 COLOUR_TEXT_REGION 17 245 22 245 50 HELIX 33 245 54 COLOUR_TEXT_REGION 33 245 54 245 50 HELIX 61 245 68 COLOUR_TEXT_REGION 61 245 68 245 50 HELIX 73 245 89 COLOUR_TEXT_REGION 73 245 89 245 50 HELIX 101 245 108 COLOUR_TEXT_REGION 101 245 108 245 50 HELIX 119 245 119 COLOUR_TEXT_REGION 119 245 119 245 50 HELIX 152 245 164 COLOUR_TEXT_REGION 152 245 164 245 50 HELIX 196 245 197 COLOUR_TEXT_REGION 196 245 197 245 50 HELIX 233 245 243 COLOUR_TEXT_REGION 233 245 243 245 50 HELIX 258 245 260 COLOUR_TEXT_REGION 258 245 260 245 50 HELIX 264 245 264 COLOUR_TEXT_REGION 264 245 264 245 50 HELIX 266 245 267 COLOUR_TEXT_REGION 266 245 267 245 50 STRAND 13 246 16 COLOUR_TEXT_REGION 13 246 16 246 51 STRAND 34 246 34 COLOUR_TEXT_REGION 34 246 34 246 51 STRAND 54 246 55 COLOUR_TEXT_REGION 54 246 55 246 51 STRAND 145 246 147 COLOUR_TEXT_REGION 145 246 147 246 51 STRAND 160 246 164 COLOUR_TEXT_REGION 160 246 164 246 51 STRAND 173 246 176 COLOUR_TEXT_REGION 173 246 176 246 51 STRAND 233 246 234 COLOUR_TEXT_REGION 233 246 234 246 51 STRAND 240 246 243 COLOUR_TEXT_REGION 240 246 243 246 51 HELIX 36 246 45 COLOUR_TEXT_REGION 36 246 45 246 50 HELIX 98 246 102 COLOUR_TEXT_REGION 98 246 102 246 50 HELIX 136 246 144 COLOUR_TEXT_REGION 136 246 144 246 50 HELIX 219 246 223 COLOUR_TEXT_REGION 219 246 223 246 50 HELIX 225 246 226 COLOUR_TEXT_REGION 225 246 226 246 50 HELIX 238 246 239 COLOUR_TEXT_REGION 238 246 239 246 50 HELIX 255 246 261 COLOUR_TEXT_REGION 255 246 261 246 50 HELIX 264 246 269 COLOUR_TEXT_REGION 264 246 269 246 50