SILENT_MODE BLOCK_FILE jp_qZE9ouI.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_qZE9ouI.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 268 32 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 33 268 42 H SPACE SUB_CHARS 1 33 268 42 E SPACE SUB_CHARS 1 33 268 42 - SPACE STRAND 22 36 28 COLOUR_TEXT_REGION 22 36 28 36 51 STRAND 66 36 73 COLOUR_TEXT_REGION 66 36 73 36 51 STRAND 78 36 80 COLOUR_TEXT_REGION 78 36 80 36 51 STRAND 103 36 106 COLOUR_TEXT_REGION 103 36 106 36 51 STRAND 161 36 166 COLOUR_TEXT_REGION 161 36 166 36 51 STRAND 180 36 181 COLOUR_TEXT_REGION 180 36 181 36 51 STRAND 206 36 208 COLOUR_TEXT_REGION 206 36 208 36 51 STRAND 212 36 216 COLOUR_TEXT_REGION 212 36 216 36 51 HELIX 3 36 13 COLOUR_TEXT_REGION 3 36 13 36 50 HELIX 34 36 48 COLOUR_TEXT_REGION 34 36 48 36 50 HELIX 91 36 101 COLOUR_TEXT_REGION 91 36 101 36 50 HELIX 111 36 119 COLOUR_TEXT_REGION 111 36 119 36 50 HELIX 125 36 136 COLOUR_TEXT_REGION 125 36 136 36 50 HELIX 144 36 150 COLOUR_TEXT_REGION 144 36 150 36 50 HELIX 170 36 175 COLOUR_TEXT_REGION 170 36 175 36 50 HELIX 179 36 179 COLOUR_TEXT_REGION 179 36 179 36 50 HELIX 189 36 199 COLOUR_TEXT_REGION 189 36 199 36 50 HELIX 202 36 205 COLOUR_TEXT_REGION 202 36 205 36 50 HELIX 222 36 241 COLOUR_TEXT_REGION 222 36 241 36 50 HELIX 245 36 262 COLOUR_TEXT_REGION 245 36 262 36 50 STRAND 22 41 28 COLOUR_TEXT_REGION 22 41 28 41 51 STRAND 66 41 73 COLOUR_TEXT_REGION 66 41 73 41 51 STRAND 78 41 80 COLOUR_TEXT_REGION 78 41 80 41 51 STRAND 103 41 106 COLOUR_TEXT_REGION 103 41 106 41 51 STRAND 143 41 146 COLOUR_TEXT_REGION 143 41 146 41 51 STRAND 161 41 166 COLOUR_TEXT_REGION 161 41 166 41 51 STRAND 180 41 182 COLOUR_TEXT_REGION 180 41 182 41 51 STRAND 207 41 208 COLOUR_TEXT_REGION 207 41 208 41 51 STRAND 212 41 217 COLOUR_TEXT_REGION 212 41 217 41 51 STRAND 222 41 223 COLOUR_TEXT_REGION 222 41 223 41 51 HELIX 3 41 13 COLOUR_TEXT_REGION 3 41 13 41 50 HELIX 35 41 48 COLOUR_TEXT_REGION 35 41 48 41 50 HELIX 91 41 101 COLOUR_TEXT_REGION 91 41 101 41 50 HELIX 111 41 119 COLOUR_TEXT_REGION 111 41 119 41 50 HELIX 125 41 136 COLOUR_TEXT_REGION 125 41 136 41 50 HELIX 147 41 150 COLOUR_TEXT_REGION 147 41 150 41 50 HELIX 169 41 175 COLOUR_TEXT_REGION 169 41 175 41 50 HELIX 179 41 179 COLOUR_TEXT_REGION 179 41 179 41 50 HELIX 189 41 199 COLOUR_TEXT_REGION 189 41 199 41 50 HELIX 202 41 206 COLOUR_TEXT_REGION 202 41 206 41 50 HELIX 224 41 240 COLOUR_TEXT_REGION 224 41 240 41 50 HELIX 245 41 262 COLOUR_TEXT_REGION 245 41 262 41 50 STRAND 22 42 27 COLOUR_TEXT_REGION 22 42 27 42 51 STRAND 66 42 73 COLOUR_TEXT_REGION 66 42 73 42 51 STRAND 79 42 80 COLOUR_TEXT_REGION 79 42 80 42 51 STRAND 86 42 87 COLOUR_TEXT_REGION 86 42 87 42 51 STRAND 104 42 107 COLOUR_TEXT_REGION 104 42 107 42 51 STRAND 161 42 166 COLOUR_TEXT_REGION 161 42 166 42 51 STRAND 179 42 180 COLOUR_TEXT_REGION 179 42 180 42 51 STRAND 205 42 209 COLOUR_TEXT_REGION 205 42 209 42 51 HELIX 2 42 13 COLOUR_TEXT_REGION 2 42 13 42 50 HELIX 34 42 48 COLOUR_TEXT_REGION 34 42 48 42 50 HELIX 90 42 101 COLOUR_TEXT_REGION 90 42 101 42 50 HELIX 111 42 119 COLOUR_TEXT_REGION 111 42 119 42 50 HELIX 125 42 137 COLOUR_TEXT_REGION 125 42 137 42 50 HELIX 144 42 151 COLOUR_TEXT_REGION 144 42 151 42 50 HELIX 170 42 174 COLOUR_TEXT_REGION 170 42 174 42 50 HELIX 189 42 199 COLOUR_TEXT_REGION 189 42 199 42 50 HELIX 212 42 216 COLOUR_TEXT_REGION 212 42 216 42 50 HELIX 222 42 241 COLOUR_TEXT_REGION 222 42 241 42 50 HELIX 245 42 261 COLOUR_TEXT_REGION 245 42 261 42 50