SILENT_MODE
BLOCK_FILE jp_awMvmEQ.concise.blc
MAX_NSEQ 169
MAX_INPUT_LEN 171
OUTPUT_FILE jp_awMvmEQ.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 107 158   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 159 107 168 H SPACE
SUB_CHARS 1 159 107 168 E SPACE
SUB_CHARS 1 159 107 168 - SPACE
STRAND 10 162 15
COLOUR_TEXT_REGION 10 162 15 162 51
STRAND 21 162 23
COLOUR_TEXT_REGION 21 162 23 162 51
STRAND 29 162 32
COLOUR_TEXT_REGION 29 162 32 162 51
STRAND 52 162 55
COLOUR_TEXT_REGION 52 162 55 162 51
STRAND 64 162 67
COLOUR_TEXT_REGION 64 162 67 162 51
STRAND 74 162 78
COLOUR_TEXT_REGION 74 162 78 162 51
STRAND 86 162 90
COLOUR_TEXT_REGION 86 162 90 162 51
STRAND 96 162 101
COLOUR_TEXT_REGION 96 162 101 162 51
STRAND 3 167 4
COLOUR_TEXT_REGION 3 167 4 167 51
STRAND 10 167 14
COLOUR_TEXT_REGION 10 167 14 167 51
STRAND 21 167 23
COLOUR_TEXT_REGION 21 167 23 167 51
STRAND 29 167 32
COLOUR_TEXT_REGION 29 167 32 167 51
STRAND 52 167 55
COLOUR_TEXT_REGION 52 167 55 167 51
STRAND 74 167 78
COLOUR_TEXT_REGION 74 167 78 167 51
STRAND 86 167 90
COLOUR_TEXT_REGION 86 167 90 167 51
STRAND 96 167 101
COLOUR_TEXT_REGION 96 167 101 167 51
STRAND 10 168 15
COLOUR_TEXT_REGION 10 168 15 168 51
STRAND 20 168 23
COLOUR_TEXT_REGION 20 168 23 168 51
STRAND 29 168 31
COLOUR_TEXT_REGION 29 168 31 168 51
STRAND 53 168 55
COLOUR_TEXT_REGION 53 168 55 168 51
STRAND 64 168 67
COLOUR_TEXT_REGION 64 168 67 168 51
STRAND 74 168 79
COLOUR_TEXT_REGION 74 168 79 168 51
STRAND 85 168 90
COLOUR_TEXT_REGION 85 168 90 168 51
STRAND 96 168 101
COLOUR_TEXT_REGION 96 168 101 168 51