SILENT_MODE BLOCK_FILE jp_p7xtKyU.concise.blc MAX_NSEQ 876 MAX_INPUT_LEN 878 OUTPUT_FILE jp_p7xtKyU.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 298 865 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 866 298 875 H SPACE SUB_CHARS 1 866 298 875 E SPACE SUB_CHARS 1 866 298 875 - SPACE STRAND 7 869 11 COLOUR_TEXT_REGION 7 869 11 869 51 STRAND 48 869 49 COLOUR_TEXT_REGION 48 869 49 869 51 STRAND 55 869 57 COLOUR_TEXT_REGION 55 869 57 869 51 STRAND 82 869 89 COLOUR_TEXT_REGION 82 869 89 869 51 STRAND 144 869 146 COLOUR_TEXT_REGION 144 869 146 869 51 STRAND 179 869 190 COLOUR_TEXT_REGION 179 869 190 869 51 STRAND 194 869 198 COLOUR_TEXT_REGION 194 869 198 869 51 STRAND 227 869 230 COLOUR_TEXT_REGION 227 869 230 869 51 STRAND 244 869 249 COLOUR_TEXT_REGION 244 869 249 869 51 STRAND 254 869 256 COLOUR_TEXT_REGION 254 869 256 869 51 STRAND 271 869 278 COLOUR_TEXT_REGION 271 869 278 869 51 STRAND 284 869 295 COLOUR_TEXT_REGION 284 869 295 869 51 HELIX 12 869 27 COLOUR_TEXT_REGION 12 869 27 869 50 HELIX 100 869 112 COLOUR_TEXT_REGION 100 869 112 869 50 HELIX 118 869 124 COLOUR_TEXT_REGION 118 869 124 869 50 HELIX 149 869 154 COLOUR_TEXT_REGION 149 869 154 869 50 HELIX 208 869 218 COLOUR_TEXT_REGION 208 869 218 869 50 STRAND 6 874 11 COLOUR_TEXT_REGION 6 874 11 874 51 STRAND 40 874 41 COLOUR_TEXT_REGION 40 874 41 874 51 STRAND 55 874 57 COLOUR_TEXT_REGION 55 874 57 874 51 STRAND 81 874 88 COLOUR_TEXT_REGION 81 874 88 874 51 STRAND 109 874 113 COLOUR_TEXT_REGION 109 874 113 874 51 STRAND 144 874 146 COLOUR_TEXT_REGION 144 874 146 874 51 STRAND 179 874 191 COLOUR_TEXT_REGION 179 874 191 874 51 STRAND 194 874 198 COLOUR_TEXT_REGION 194 874 198 874 51 STRAND 227 874 230 COLOUR_TEXT_REGION 227 874 230 874 51 STRAND 244 874 249 COLOUR_TEXT_REGION 244 874 249 874 51 STRAND 254 874 256 COLOUR_TEXT_REGION 254 874 256 874 51 STRAND 271 874 278 COLOUR_TEXT_REGION 271 874 278 874 51 STRAND 285 874 295 COLOUR_TEXT_REGION 285 874 295 874 51 HELIX 13 874 29 COLOUR_TEXT_REGION 13 874 29 874 50 HELIX 100 874 108 COLOUR_TEXT_REGION 100 874 108 874 50 HELIX 118 874 122 COLOUR_TEXT_REGION 118 874 122 874 50 HELIX 208 874 217 COLOUR_TEXT_REGION 208 874 217 874 50 STRAND 8 875 9 COLOUR_TEXT_REGION 8 875 9 875 51 STRAND 47 875 49 COLOUR_TEXT_REGION 47 875 49 875 51 STRAND 56 875 56 COLOUR_TEXT_REGION 56 875 56 875 51 STRAND 77 875 80 COLOUR_TEXT_REGION 77 875 80 875 51 STRAND 84 875 89 COLOUR_TEXT_REGION 84 875 89 875 51 STRAND 145 875 145 COLOUR_TEXT_REGION 145 875 145 875 51 STRAND 169 875 170 COLOUR_TEXT_REGION 169 875 170 875 51 STRAND 179 875 186 COLOUR_TEXT_REGION 179 875 186 875 51 STRAND 194 875 197 COLOUR_TEXT_REGION 194 875 197 875 51 STRAND 227 875 230 COLOUR_TEXT_REGION 227 875 230 875 51 STRAND 244 875 250 COLOUR_TEXT_REGION 244 875 250 875 51 STRAND 255 875 257 COLOUR_TEXT_REGION 255 875 257 875 51 STRAND 271 875 278 COLOUR_TEXT_REGION 271 875 278 875 51 STRAND 284 875 286 COLOUR_TEXT_REGION 284 875 286 875 51 STRAND 288 875 295 COLOUR_TEXT_REGION 288 875 295 875 51 HELIX 10 875 24 COLOUR_TEXT_REGION 10 875 24 875 50 HELIX 100 875 113 COLOUR_TEXT_REGION 100 875 113 875 50 HELIX 118 875 126 COLOUR_TEXT_REGION 118 875 126 875 50 HELIX 148 875 156 COLOUR_TEXT_REGION 148 875 156 875 50 HELIX 209 875 218 COLOUR_TEXT_REGION 209 875 218 875 50