SILENT_MODE BLOCK_FILE jp_TLcZ38d.concise.blc MAX_NSEQ 767 MAX_INPUT_LEN 769 OUTPUT_FILE jp_TLcZ38d.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 303 756 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 757 303 766 H SPACE SUB_CHARS 1 757 303 766 E SPACE SUB_CHARS 1 757 303 766 - SPACE STRAND 18 760 21 COLOUR_TEXT_REGION 18 760 21 760 51 STRAND 43 760 45 COLOUR_TEXT_REGION 43 760 45 760 51 STRAND 79 760 85 COLOUR_TEXT_REGION 79 760 85 760 51 STRAND 123 760 129 COLOUR_TEXT_REGION 123 760 129 760 51 STRAND 168 760 171 COLOUR_TEXT_REGION 168 760 171 760 51 STRAND 204 760 206 COLOUR_TEXT_REGION 204 760 206 760 51 STRAND 233 760 237 COLOUR_TEXT_REGION 233 760 237 760 51 STRAND 262 760 269 COLOUR_TEXT_REGION 262 760 269 760 51 HELIX 4 760 13 COLOUR_TEXT_REGION 4 760 13 760 50 HELIX 30 760 39 COLOUR_TEXT_REGION 30 760 39 760 50 HELIX 65 760 75 COLOUR_TEXT_REGION 65 760 75 760 50 HELIX 101 760 118 COLOUR_TEXT_REGION 101 760 118 760 50 HELIX 150 760 163 COLOUR_TEXT_REGION 150 760 163 760 50 HELIX 182 760 196 COLOUR_TEXT_REGION 182 760 196 760 50 HELIX 215 760 227 COLOUR_TEXT_REGION 215 760 227 760 50 HELIX 245 760 257 COLOUR_TEXT_REGION 245 760 257 760 50 HELIX 292 760 301 COLOUR_TEXT_REGION 292 760 301 760 50 STRAND 19 765 22 COLOUR_TEXT_REGION 19 765 22 765 51 STRAND 42 765 45 COLOUR_TEXT_REGION 42 765 45 765 51 STRAND 80 765 86 COLOUR_TEXT_REGION 80 765 86 765 51 STRAND 123 765 129 COLOUR_TEXT_REGION 123 765 129 765 51 STRAND 168 765 172 COLOUR_TEXT_REGION 168 765 172 765 51 STRAND 203 765 207 COLOUR_TEXT_REGION 203 765 207 765 51 STRAND 233 765 238 COLOUR_TEXT_REGION 233 765 238 765 51 STRAND 263 765 269 COLOUR_TEXT_REGION 263 765 269 765 51 HELIX 4 765 12 COLOUR_TEXT_REGION 4 765 12 765 50 HELIX 30 765 39 COLOUR_TEXT_REGION 30 765 39 765 50 HELIX 65 765 75 COLOUR_TEXT_REGION 65 765 75 765 50 HELIX 101 765 118 COLOUR_TEXT_REGION 101 765 118 765 50 HELIX 150 765 163 COLOUR_TEXT_REGION 150 765 163 765 50 HELIX 182 765 196 COLOUR_TEXT_REGION 182 765 196 765 50 HELIX 215 765 227 COLOUR_TEXT_REGION 215 765 227 765 50 HELIX 245 765 257 COLOUR_TEXT_REGION 245 765 257 765 50 HELIX 290 765 301 COLOUR_TEXT_REGION 290 765 301 765 50 STRAND 18 766 21 COLOUR_TEXT_REGION 18 766 21 766 51 STRAND 43 766 45 COLOUR_TEXT_REGION 43 766 45 766 51 STRAND 50 766 54 COLOUR_TEXT_REGION 50 766 54 766 51 STRAND 79 766 82 COLOUR_TEXT_REGION 79 766 82 766 51 STRAND 95 766 95 COLOUR_TEXT_REGION 95 766 95 766 51 STRAND 123 766 129 COLOUR_TEXT_REGION 123 766 129 766 51 STRAND 169 766 171 COLOUR_TEXT_REGION 169 766 171 766 51 STRAND 233 766 235 COLOUR_TEXT_REGION 233 766 235 766 51 STRAND 262 766 269 COLOUR_TEXT_REGION 262 766 269 766 51 HELIX 4 766 13 COLOUR_TEXT_REGION 4 766 13 766 50 HELIX 30 766 39 COLOUR_TEXT_REGION 30 766 39 766 50 HELIX 66 766 75 COLOUR_TEXT_REGION 66 766 75 766 50 HELIX 101 766 117 COLOUR_TEXT_REGION 101 766 117 766 50 HELIX 150 766 163 COLOUR_TEXT_REGION 150 766 163 766 50 HELIX 184 766 196 COLOUR_TEXT_REGION 184 766 196 766 50 HELIX 216 766 227 COLOUR_TEXT_REGION 216 766 227 766 50 HELIX 245 766 257 COLOUR_TEXT_REGION 245 766 257 766 50 HELIX 292 766 301 COLOUR_TEXT_REGION 292 766 301 766 50