QUERY                  : MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMAMEKGKYVGELRKALLSADVYTFNFSKESAYFFFEKNLKDVSFRLGSFNLEKVE : QUERY 
UniRef90_UPI0002233FAE : MERKVSRICLASEPNIIHFLQVSWEKTLGSGFDVILTDGQSVWTGTVSASEISREADDMAMEKEKYVDELRKALVSADAYKFNFSKESSHFSFEKNLKNVSFRLGSFNLEKV- : UniRef90_UPI0002233FAE
UniRef90_A2VDW3        : MERKVSRVCLASEPDIIHFLQVAWEKTLGSGFVITLTDGQSAWTGTVCESDISQEADDMAMEKEKYVDELRKALVSGDTYKFNFSKESHYFSFEKNLKDVSFRLGSFKLEKI- : UniRef90_A2VDW3
UniRef90_UPI0004546193 : MERKVSRISLASEPNITYFLQVSWEETVGSGFVITLTDGHSAWTATVSESEISQEADDMAMEKEKYADELRKALVSGDTYKFIFSRESCHFSLEKELKDVSFRLGSFNLDKV- : UniRef90_UPI0004546193
UniRef90_UPI0004446ADC : MERKLSRIHLAVEPDVIHFLQVTWEKTLDSGFAITLTDGQSAWTGTVCESDISQEADDMAMEKEKYVEELRRALVSGDRYTFDFSKESCHFSLEKKLKDVSFRLCTFNLKKV- : UniRef90_UPI0004446ADC
UniRef90_I3N9L8        : MERKVSKIRLASEAHIIHFLQVSWEKTLGSGFVITLTDGQSAWTGTVSELAISQEADDMAMEREKYVDELRKALVSGNTYKFDFSKESCHFYFEKNLKDVSFRIGSFNLEEVE : UniRef90_I3N9L8
UniRef90_UPI0003330D59 : MEKTVSRICLASEPSIVHFLQVSWEKTLGSGFVITLTDGHSAWTGTVCESEISQEAVDMAMEKEKYVEELRRALTAGGAYKFSFSEESAQLSCDKNLQDVSFRLGSFSLDKV- : UniRef90_UPI0003330D59
UniRef90_UPI0003C28324 : MEKIVNRICLASTPDTIYFLQVAWEKDLSTGFVATLSDGQSAWTGTVSEAEISREAADMEMEREKYVEELRKALVPANIYNFDISKDEFHFSYEKNLKDFSFRLGSLKLQKV- : UniRef90_UPI0003C28324
UniRef90_G3W756        : MEHNMSRIHMVSEPSIIYFLQVSWEKDLGSGFDITLTDGQSAWNGTVTASEISREADDMAMERDKYVDELRKALVPANVYKFDFSKENCHFSYEKSLKDVSFILGSLNLQKV- : UniRef90_G3W756
UniRef90_UPI0003F0A10B : MEKKIKRIYLASEPTVIHFLQISWERTLGSGYHITLTDGQSVWTGTVSDSEISQEADDMAMDKEKYIDELRKALVSADAYKFNFSKESGHFSFEKNVKNVSFRLGSFNLEK-- : UniRef90_UPI0003F0A10B
UniRef90_UPI00038EAC7E : MERKISRICFASKPKAIQFLQVSWERTLGSGFVITLTDGQSAWTGTVSESEVAQEADDMAMEKEKYVEELRKALVSGDTYKFEFSEGDCCLSCEKILKDVSFRLGSFHLEK-- : UniRef90_UPI00038EAC7E
UniRef90_UPI0003835501 : MEKTLSRIHPVSDPEATYFLQVSWEKDLGAGFGITLSDGQCAWTGAVSEAEISREAADMEMSREKYVEELKRALIAGEEYNFSVSRDECHFSYERNLKDGSFKLGSLKLQKV- : UniRef90_UPI0003835501
UniRef90_G1KKY3        : MEKKVRRIYPLSEPGTTYFLQIVWEKDLGTGFDVILTDGQSAWSGRVPKEEISREAADMEMEQKKYVEELRKVFIPSNIYNFDISKEGLHFSYEKKLRDLSFRLGSLKLQRI- : UniRef90_G1KKY3
UniRef90_UPI00033401D5 : MEKKIRRISLASEPNIIHFLQVSWEKTLGSGFVVTLTDGQSVWTGTVSASEISQEADDMTMEEERYVDELRHALVPPDAYKFNFSKESCHFSLEKNLKNVSV----------- : UniRef90_UPI00033401D5
UniRef90_U3KEL8        : MEKTLNRIHPVSDPEATYFLQVSWEKDLGTGFSLLLSDCQCAWTGKVSEADISREADDIEMDREKYVEELRKALISAGKYNFVISRDECHFSYERSLKDGSFRLGSLKLQEV- : UniRef90_U3KEL8
UniRef90_Q6GR07        : MEKKIRSICISSYPGAIYFLQIAWKKDLGDGFTVALTDGHSAWTGEVSQEDVSQEAKDMEMERSNYVEELRKALIPANKYNFDLNPEIYHFTYEKTLKEVAFKLGSTKLKSVQ : UniRef90_Q6GR07
UniRef90_H3AV79        : MQKQVCKIQPVCEPDSIYYLCITWKDNIGRGFDLILCDGQSAWTGTVSEEEISKEAVEVAMEREKYVDELCKALTRTENYCFDFSKDGLQFSYEKLLKDVSFKLGSMELTIV- : UniRef90_H3AV79
UniRef90_V9L2M0        : MESHVCRIWPLSVPDFVHYLHISWETDLGKGFTVTLWNGQHAWSGKVSETQMTVEANEAEMEREKYLAELRQALTSGENYSFDISKEMLNFTYEKVLQDFSFKLGSVELKKV- : UniRef90_V9L2M0
UniRef90_I3KG06        : MSGTVHQIRLSDDPDTPYFLRVDWAIDLGAGFTLALTNGSSAWIGEVSEDDMTREANDIGVPRERYVEDLLQALTKSEMYTFGLSADRRCLLYEKTCNDISVHLGSVELQP-- : UniRef90_I3KG06
UniRef90_Q6PBP2        : -SSSVRQISISSEPQRCFFLKLEWAEDLGSGFVIFLCDGESAWSGEVSEEDVSREAREMEMERDRYVCDLQLALTGAGEFTFQLTPEQLQLSYEKVQKDISFRLGVVDLQPV- : UniRef90_Q6PBP2
UniRef90_W5M1T7        : MGTSVRRISISSEPGKIFFLRVKRGEDLGSGFSVVLCDGQSAWSGAVSEEEVSREAKEMEMKRENYVKDLSQALLTERSYSFHVSRDALLLSYDKVQKEISFKLGSVELHAV- : UniRef90_W5M1T7
UniRef90_H2VEI5        : -QTSVRPVHVPSEPDSSYFLRVDWSRGLGSGFELLLTDGQNAWRGDVSEAAVCREAEELEMQPERYIQDLQQALTGTENYSFVLSSSAVTLAYEKVQRDISFRMGSVLLKAV- : UniRef90_H2VEI5
UniRef90_UPI0003B4C657 : MSGTVQQITL--NPGIPYFLRVDWAVDLGAGFTLALTDGSSAWIGEVSEDEMTREANDMGVIREKYVEDLLQALTKGEEYSFCLSLDHNLLSYQKICNNILIHLGSVELQP-- : UniRef90_UPI0003B4C657
UniRef90_W5UK42        : MKVTVCEISIASTPECTFYLKLEWAKDLGAGFVVMLCDGASAWSGEVSEEDVSKEAQELEMPRERYVHDLQLILSGEGSYSFHLAPKQLQLSYEKVQRDMSFRYGMVELLPV- : UniRef90_W5UK42
UniRef90_UPI0003AF312C : MHTSVREINLCS--DTSYFLRVDWEGNFSTGFQLLLTDGQDAWRGEVRGEVVCNEAEELEMPLERYIEDVEQAFTGSNTYNFTLTPNTLTLTYEKMQKDISFRLGCVLLKAV- : UniRef90_UPI0003AF312C
UniRef90_UPI0002A47A0C : MNTAVREIHISSKPGSSYFLRVDWERSLASGFRVLLTDGQDAWSGEVGAATIGGEAEELEMTREKYVQDLERALTGADPYSFSLSPESVTLTYEKMQKEISV----------- : UniRef90_UPI0002A47A0C
UniRef90_V8NW22        : MEKKLRQLCPISDPDTTYFLQITWCKDLGMGFDLILSDGQSSWIGRVSEKEISTEAADMEMEQEKYVEELKK-----------------------------FRLGSLILQRV- : UniRef90_V8NW22
UniRef90_C1BYZ6        : MSGLVRQIRVGLEPSTPYFLWVDWVEDLGSGFTLVFSDGSSCFLGEVSGEDVTREANALGVKREIYVEDLHRVFTIEKEHMFHLSPDNSCLTYKKTQKGIWVNVCAVDLHP-- : UniRef90_C1BYZ6
UniRef90_UPI00044458C3 : MNTSVREIHLSSQADFSYFLRVDWERGLGFGFKLLLTDGHKAWRGKVSEAVVNEEAEELEMAKEKYIQDLQEALTEPESYCFTLSSHTVTLTYEKMQKDISFKLGSVSLDAVK : UniRef90_UPI00044458C3
UniRef90_B3RLH3        : -EKYLCRIEAAGQK---YYLMTSWEDDVDQLCKLFLTDGQSAWHTVVTDGVANRLARSVQMDLHEYLKQTKKAFTSSANSNFHFDHNTVEFAWKKYLRDMKFQLGKLKMAAV- : UniRef90_B3RLH3
UniRef90_C3YDS9        : --RTLCKLQAGGQP---YYLLTNVVQNGREGFQLTLCDGLSAWAGQVDGEDMKEMADESGMEFETFVAESVRALTRENMITFHYSVEIRQFSWKKYIEKVRFQLGSMKL---- : UniRef90_C3YDS9
UniRef90_V3ZKB8        : MSKKVLSKLSVSGSKKNYFLLSTTTEDKEDGFQLILSNGESVWEGELSADEIDKQRKKLKMDFNTYYIQTEKAFTRSDNYEYQIQDDTANLSWKKHVTNDDIKLGHVVL---- : UniRef90_V3ZKB8
UniRef90_UPI0002B8E114 : MEGKLHQIKID---DQVYFIQLSCAEN--NKYEAVFTDGSTCWAGGITDNEIQTSVTELQMNTDTYVTLMHSALCGGNSATFDYALQHLTLQWKKVDGDIKYCLGSIDLK--- : UniRef90_UPI0002B8E114
UniRef90_UPI00035A23F0 : -ETVLAEIDVQPQGDGHFYLQTRLKDGGREGFTLTLTDGASVWDGTISEDMLDQLCKKRKMDFNTYVDQTRAAFTRQEMFEYHLSPETAQLAWKKHL---------------- : UniRef90_UPI00035A23F0
UniRef90_A7RTE3        : -ESSLCKI---STDLGSYYLLTKLYNGGRDGLEMTICNGENIWRGKVSPEEISSMAEAIDTELESYTQQMVKAFTGTDTENFTIENNELKFYWKKQLADVKFQLGCVDFSTVD : UniRef90_A7RTE3
UniRef90_M7BBL3        : --------------------------------------------GSVAEAEISKEADDMEMEREKYVKELRKALLPANMYTFDVSKESCDFSYEKNLKDVS------------ : UniRef90_M7BBL3
UniRef90_UPI0003AF3FD9 : ---------------------------------------------KISEDDMTREANDIGVPRERYVEDLLQALTKSEMYTFGLSPDRRCLLYEKTCNDISVHLGSVELQP-- : UniRef90_UPI0003AF3FD9
UniRef90_F7EH01        : ----------------------------------------------------------MAMEKEKYMDELRKALVSADTYNFDFCKESGHFFYEKSLRDVSFQLGSVELQEV- : UniRef90_F7EH01
UniRef90_UPI0003F09D12 : -----------------------------DGFRLRLTNGKDAWQVDIDLDTVEGLAKTCGMELEDYIVEIKQAFTRENKFEYHVKKQSIEFSWKKVMEKIKYQLGSVVLDAIK : UniRef90_UPI0003F09D12
UniRef90_UPI00026538E5 : MERSLCNI---SVGDKVYFLSSSTSEQNDPEFRVTLIEASCAWKGTF--GDIQENAKCIDLQEDELVDLTRKALTRQNMINFEYQKNKVELSWKKVVSSVKFQVGKVSLDAV- : UniRef90_UPI00026538E5
UniRef90_R7V2P7        : --THFCRLDLD---ENSFYLLTNLKKN-GTELALSLSDTESAWKGNLSKADLAAQCKRAKIECKEFMEQTVKALTQKNMHSFQYQIDNVTLHWKKIMSDIKVHLGDVTLKK-- : UniRef90_R7V2P7
UniRef90_UPI0002B4389F : --------------NQTYFIFSSFK----SGINLRLTNGWEVYNGNVSEHQLSLMANRIDMCPLTFLQSIKDAFCNSELFSFDLNKNSCELVWKKILSDTKFQLASLTLQK-- : UniRef90_UPI0002B4389F
UniRef90_K1QHC8        : MTTWFNRIQLST--GGTAYLLVNYKNEDTDEFLLSISDGSKVWKGKFDEDDIENMRKTLKLDYESLLKKTKDALTSGLSYEYKLNSQRTEFQWHAPDEDITYMLGS------- : UniRef90_K1QHC8
UniRef90_I1GD25        : ------------------------------------SDAHQTWVGVVTYRQIRETAKKSKSSEREYIDDTCTALTGGEVYTTTLSPNSLEFAWKKHLDNIKVFLGSVVME--- : UniRef90_I1GD25

                       : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111 :
OrigSeq                : MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDMAMEKGKYVGELRKALLSADVYTFNFSKESAYFFFEKNLKDVSFRLGSFNLEKVE : OrigSeq

Jnet                   : ---EEEEEEE------EEEEEEEEE------EEEEEE----EEEEEE-HHHHHHHHHHH----HHHHHHHHHHH-----EEEEEE---EEEEEEEE----EEEEEEEE----- : Jnet
jhmm                   : ----EEEEEE------EEEEEEEEE-----EEEEEEE----EEEEEE-HHHHHHHHHH----HHHHHHHHHHHH-----EEEEEE---EEEEEEEE----EEEEEEEE----- : jhmm
jpssm                  : ---EEEEEEE------EEEEEEEEE------EEEEEE-----EEEE--HHHHHHHHHHHH---HHHHHHHHHH------EEEEE-----EEEEEEEE---EEEEEEEE----- : jpssm

Lupas 14               : ----------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21               : ----------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28               : ----------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25                : ----BB-B-BB-----BBBBBB-B---B--BB-BBBB-B--BB-B-B----B--BB--B-B----BB--B--BBB----B-B-B----B-BBB---B--B-BBBBBB-B--B- : Jnet_25
Jnet_5                 : ----B--B----------BB-B---------B-BBBB-B--B---------B-----------------B---B--------------B-B-B------B-B-BB-------- : Jnet_5
Jnet_0                 : -------------------B-------------B-B--B------------------------------B------------------------------------------- : Jnet_0
Jnet Rel               : 99817998863788845888887524578823789854887237751558899999980468068999998852688845775317632688777626856887305513799 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.