SILENT_MODE BLOCK_FILE jp_9zeiGyO.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_9zeiGyO.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 143 8 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 9 143 18 H SPACE SUB_CHARS 1 9 143 18 E SPACE SUB_CHARS 1 9 143 18 - SPACE STRAND 116 12 120 COLOUR_TEXT_REGION 116 12 120 12 51 HELIX 4 12 14 COLOUR_TEXT_REGION 4 12 14 12 50 HELIX 18 12 23 COLOUR_TEXT_REGION 18 12 23 12 50 HELIX 38 12 51 COLOUR_TEXT_REGION 38 12 51 12 50 HELIX 57 12 65 COLOUR_TEXT_REGION 57 12 65 12 50 HELIX 72 12 79 COLOUR_TEXT_REGION 72 12 79 12 50 HELIX 82 12 101 COLOUR_TEXT_REGION 82 12 101 12 50 HELIX 108 12 109 COLOUR_TEXT_REGION 108 12 109 12 50 HELIX 137 12 139 COLOUR_TEXT_REGION 137 12 139 12 50 STRAND 116 17 119 COLOUR_TEXT_REGION 116 17 119 17 51 HELIX 4 17 14 COLOUR_TEXT_REGION 4 17 14 17 50 HELIX 18 17 22 COLOUR_TEXT_REGION 18 17 22 17 50 HELIX 40 17 52 COLOUR_TEXT_REGION 40 17 52 17 50 HELIX 57 17 65 COLOUR_TEXT_REGION 57 17 65 17 50 HELIX 72 17 79 COLOUR_TEXT_REGION 72 17 79 17 50 HELIX 82 17 99 COLOUR_TEXT_REGION 82 17 99 17 50 HELIX 108 17 109 COLOUR_TEXT_REGION 108 17 109 17 50 HELIX 137 17 140 COLOUR_TEXT_REGION 137 17 140 17 50 STRAND 116 18 120 COLOUR_TEXT_REGION 116 18 120 18 51 HELIX 5 18 14 COLOUR_TEXT_REGION 5 18 14 18 50 HELIX 17 18 24 COLOUR_TEXT_REGION 17 18 24 18 50 HELIX 32 18 50 COLOUR_TEXT_REGION 32 18 50 18 50 HELIX 56 18 65 COLOUR_TEXT_REGION 56 18 65 18 50 HELIX 72 18 79 COLOUR_TEXT_REGION 72 18 79 18 50 HELIX 82 18 102 COLOUR_TEXT_REGION 82 18 102 18 50 HELIX 108 18 110 COLOUR_TEXT_REGION 108 18 110 18 50 HELIX 112 18 112 COLOUR_TEXT_REGION 112 18 112 18 50