SILENT_MODE BLOCK_FILE jp_0ragZvy.concise.blc MAX_NSEQ 711 MAX_INPUT_LEN 713 OUTPUT_FILE jp_0ragZvy.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 374 700 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 701 374 710 H SPACE SUB_CHARS 1 701 374 710 E SPACE SUB_CHARS 1 701 374 710 - SPACE STRAND 9 704 19 COLOUR_TEXT_REGION 9 704 19 704 51 STRAND 24 704 28 COLOUR_TEXT_REGION 24 704 28 704 51 STRAND 357 704 358 COLOUR_TEXT_REGION 357 704 358 704 51 HELIX 32 704 37 COLOUR_TEXT_REGION 32 704 37 704 50 HELIX 42 704 49 COLOUR_TEXT_REGION 42 704 49 704 50 HELIX 56 704 68 COLOUR_TEXT_REGION 56 704 68 704 50 HELIX 74 704 82 COLOUR_TEXT_REGION 74 704 82 704 50 HELIX 89 704 102 COLOUR_TEXT_REGION 89 704 102 704 50 HELIX 112 704 137 COLOUR_TEXT_REGION 112 704 137 704 50 HELIX 151 704 158 COLOUR_TEXT_REGION 151 704 158 704 50 HELIX 166 704 180 COLOUR_TEXT_REGION 166 704 180 704 50 HELIX 187 704 195 COLOUR_TEXT_REGION 187 704 195 704 50 HELIX 201 704 211 COLOUR_TEXT_REGION 201 704 211 704 50 HELIX 219 704 230 COLOUR_TEXT_REGION 219 704 230 704 50 HELIX 237 704 246 COLOUR_TEXT_REGION 237 704 246 704 50 HELIX 265 704 277 COLOUR_TEXT_REGION 265 704 277 704 50 HELIX 284 704 301 COLOUR_TEXT_REGION 284 704 301 704 50 HELIX 309 704 319 COLOUR_TEXT_REGION 309 704 319 704 50 HELIX 328 704 348 COLOUR_TEXT_REGION 328 704 348 704 50 STRAND 9 709 13 COLOUR_TEXT_REGION 9 709 13 709 51 STRAND 16 709 19 COLOUR_TEXT_REGION 16 709 19 709 51 STRAND 24 709 28 COLOUR_TEXT_REGION 24 709 28 709 51 STRAND 357 709 358 COLOUR_TEXT_REGION 357 709 358 709 51 HELIX 32 709 37 COLOUR_TEXT_REGION 32 709 37 709 50 HELIX 41 709 49 COLOUR_TEXT_REGION 41 709 49 709 50 HELIX 56 709 68 COLOUR_TEXT_REGION 56 709 68 709 50 HELIX 74 709 82 COLOUR_TEXT_REGION 74 709 82 709 50 HELIX 89 709 101 COLOUR_TEXT_REGION 89 709 101 709 50 HELIX 112 709 137 COLOUR_TEXT_REGION 112 709 137 709 50 HELIX 151 709 159 COLOUR_TEXT_REGION 151 709 159 709 50 HELIX 166 709 179 COLOUR_TEXT_REGION 166 709 179 709 50 HELIX 187 709 195 COLOUR_TEXT_REGION 187 709 195 709 50 HELIX 201 709 211 COLOUR_TEXT_REGION 201 709 211 709 50 HELIX 221 709 231 COLOUR_TEXT_REGION 221 709 231 709 50 HELIX 237 709 246 COLOUR_TEXT_REGION 237 709 246 709 50 HELIX 265 709 276 COLOUR_TEXT_REGION 265 709 276 709 50 HELIX 284 709 300 COLOUR_TEXT_REGION 284 709 300 709 50 HELIX 309 709 319 COLOUR_TEXT_REGION 309 709 319 709 50 HELIX 329 709 348 COLOUR_TEXT_REGION 329 709 348 709 50 STRAND 9 710 19 COLOUR_TEXT_REGION 9 710 19 710 51 STRAND 24 710 28 COLOUR_TEXT_REGION 24 710 28 710 51 STRAND 251 710 252 COLOUR_TEXT_REGION 251 710 252 710 51 HELIX 32 710 37 COLOUR_TEXT_REGION 32 710 37 710 50 HELIX 43 710 50 COLOUR_TEXT_REGION 43 710 50 710 50 HELIX 56 710 68 COLOUR_TEXT_REGION 56 710 68 710 50 HELIX 74 710 82 COLOUR_TEXT_REGION 74 710 82 710 50 HELIX 90 710 103 COLOUR_TEXT_REGION 90 710 103 710 50 HELIX 114 710 137 COLOUR_TEXT_REGION 114 710 137 710 50 HELIX 151 710 157 COLOUR_TEXT_REGION 151 710 157 710 50 HELIX 166 710 180 COLOUR_TEXT_REGION 166 710 180 710 50 HELIX 188 710 195 COLOUR_TEXT_REGION 188 710 195 710 50 HELIX 200 710 212 COLOUR_TEXT_REGION 200 710 212 710 50 HELIX 215 710 229 COLOUR_TEXT_REGION 215 710 229 710 50 HELIX 238 710 246 COLOUR_TEXT_REGION 238 710 246 710 50 HELIX 250 710 250 COLOUR_TEXT_REGION 250 710 250 710 50 HELIX 265 710 277 COLOUR_TEXT_REGION 265 710 277 710 50 HELIX 284 710 302 COLOUR_TEXT_REGION 284 710 302 710 50 HELIX 310 710 319 COLOUR_TEXT_REGION 310 710 319 710 50 HELIX 327 710 348 COLOUR_TEXT_REGION 327 710 348 710 50