Last position-specific scoring matrix computed, weighted observed percentages rounded down, information per position, and relative weight of gapless real matches to pseudocounts A R N D C Q E G H I L K M F P S T W Y V A R N D C Q E G H I L K M F P S T W Y V 1 I -2 -3 -4 -3 -1 -3 -4 -4 -4 5 2 -3 1 0 -3 -3 -1 -3 -2 3 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0.43 0.03 2 M -1 -2 -2 -3 -2 -1 -2 -3 -2 1 2 -2 6 0 -3 -2 -1 -2 -1 1 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0.39 0.03 3 G 0 -3 -1 -2 -3 -2 -2 6 -2 -4 -4 -2 -3 -3 -2 0 -2 -3 -3 -3 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1.08 0.03 4 D -2 -2 1 6 -4 0 2 -2 -1 -4 -4 -1 -3 -4 -2 0 -1 -5 -3 -4 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1.00 0.04 5 K -1 2 0 -1 -4 1 1 -2 -1 -3 -3 6 -2 -4 -1 -1 -1 -4 -2 -3 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0.68 0.10 6 T -1 -2 -1 -2 -2 -1 -1 -2 -2 -2 -2 -1 -2 -3 5 1 5 -3 -2 -1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 68 0 0 0 0.75 0.10 7 V -1 -3 -3 -4 -1 -3 -3 -4 -4 2 1 -3 0 -1 -3 -2 0 -3 -2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0.51 0.10 8 R -2 6 -1 -2 -4 1 0 -2 -1 -3 -3 4 -2 -3 -2 -1 -1 -3 -2 -3 0 68 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 0.74 0.10 9 V -1 -3 -4 -4 -1 -3 -3 -4 -4 2 3 -3 1 -1 -3 -2 -1 -3 -2 4 0 0 0 0 0 0 0 0 0 0 32 0 0 0 0 0 0 0 0 68 0.43 0.10 10 R -2 6 -1 -2 -4 1 0 -3 -1 -4 -3 2 -2 -3 -3 -1 -2 -3 -2 -3 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.93 0.10 11 A 3 -2 -1 -2 -2 -2 -2 5 -2 -3 -3 -1 -2 -3 -2 0 -1 -3 -3 -2 50 0 0 0 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0.62 0.10 12 D -2 -1 1 6 -4 0 4 -2 -1 -4 -4 0 -3 -4 -2 -1 -1 -4 -3 -3 0 0 0 68 0 0 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0.87 0.10 13 L -2 -2 -3 -4 -2 -2 -3 -4 -1 1 3 -3 3 1 -3 -3 -2 0 4 0 0 0 0 0 0 0 0 0 0 0 56 0 14 0 0 0 0 0 30 0 0.47 0.11 14 H -2 -1 0 -2 -4 0 0 -3 9 -4 -3 -1 -2 -2 -3 -1 -2 -3 2 -4 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 1.16 0.11 15 H -2 -1 0 -2 -3 2 0 -3 7 -3 -3 -1 -2 0 -3 -1 -2 0 5 -3 0 0 0 0 0 16 0 0 54 0 0 0 0 0 0 0 0 0 30 0 0.74 0.11 16 I -2 -3 -4 -4 -2 -3 -4 -4 -4 5 3 -3 1 0 -3 -3 -1 -3 -2 2 0 0 0 0 0 0 0 0 0 70 30 0 0 0 0 0 0 0 0 0 0.51 0.11 17 I -2 -3 -4 -4 -2 -3 -4 -4 -4 5 3 -3 1 0 -3 -3 -1 -3 -2 2 0 0 0 0 0 0 0 0 0 70 30 0 0 0 0 0 0 0 0 0 0.51 0.11 18 K -1 2 -1 -1 -4 1 1 -2 -1 -3 -3 6 -2 -4 -1 -1 -1 -4 -2 -3 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0.70 0.11 19 I -2 -2 3 -1 -2 -2 -2 -3 -2 4 0 -2 0 -1 -3 -2 -1 -3 -2 2 0 0 30 0 0 0 0 0 0 70 0 0 0 0 0 0 0 0 0 0 0.35 0.11 20 E -2 -1 -1 3 -4 1 4 -3 0 -3 -3 0 -2 0 -2 -1 -2 -1 4 -3 0 0 0 16 0 0 54 0 0 0 0 0 0 0 0 0 0 0 30 0 0.56 0.11 21 T 0 -2 0 -1 -1 -1 -1 -2 -2 -1 -2 -1 -1 -3 -1 1 6 -3 -2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0.66 0.11 22 A 5 -2 -2 -2 -1 -1 -1 0 -2 -2 -2 -1 -1 -3 -1 1 0 -3 -2 -1 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.57 0.11 23 K -1 2 0 -1 -4 3 1 -2 -1 -3 -3 5 -2 -4 -1 -1 -1 -3 -2 -3 0 0 0 0 0 16 0 0 0 0 0 84 0 0 0 0 0 0 0 0 0.64 0.11 24 N -2 -1 7 1 -3 0 -1 -1 0 -4 -4 -1 -3 -4 -2 0 0 -4 -3 -3 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.94 0.11 25 G 0 -3 -1 -2 -3 -2 -3 6 -3 -4 -4 -2 -3 -4 -3 -1 -2 -3 -4 -4 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1.21 0.11 26 G 0 -3 -1 -2 -3 -2 -3 6 -3 -4 -4 -2 -3 -4 -3 -1 -2 -3 -4 -4 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1.21 0.11 27 N -1 -1 6 1 -2 0 -1 -1 0 -4 -4 -1 -2 -3 -2 3 0 -4 -2 -3 0 0 70 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0.68 0.11 28 V -1 -3 -4 -4 -1 -3 -3 -4 -4 4 1 -3 1 -1 -3 -2 -1 -3 -2 4 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 70 0.50 0.11 29 K -1 4 -1 -1 -4 1 0 -2 -1 -3 -3 5 -2 -4 -2 -1 -1 -3 -2 -3 0 30 0 0 0 0 0 0 0 0 0 70 0 0 0 0 0 0 0 0 0.67 0.11 30 E -2 -1 0 4 -4 1 5 -2 -1 -4 -4 0 -3 -4 -2 -1 -1 -4 -3 -3 0 0 0 30 0 0 70 0 0 0 0 0 0 0 0 0 0 0 0 0 0.80 0.11 31 V -1 -3 -4 -4 -1 -3 -3 -4 -4 4 1 -3 1 -1 -3 -2 -1 -3 -2 4 0 0 0 0 0 0 0 0 0 30 0 0 0 0 0 0 0 0 0 70 0.50 0.11 32 M -1 -2 -3 -4 -2 -1 -3 -3 -2 1 1 -2 6 -1 -3 -2 -1 -2 -1 3 0 0 0 0 0 0 0 0 0 0 0 0 70 0 0 0 0 0 0 30 0.47 0.11 33 D -2 -1 0 5 -4 1 4 -2 -1 -4 -4 0 -3 -4 -2 -1 -1 -4 -3 -3 0 0 0 59 0 0 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0.85 0.11 34 Q -1 2 -2 -2 -3 2 -1 -3 -2 3 0 3 0 -2 -2 -1 -1 -3 -2 0 0 16 0 0 0 13 0 0 0 41 0 30 0 0 0 0 0 0 0 0 0.25 0.11 35 A 4 4 -1 -2 -2 0 -1 -1 -1 -2 -2 1 -2 -3 -2 0 -1 -3 -2 -1 59 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.44 0.11 36 L -1 -3 -4 -4 -2 -3 -3 -4 -3 2 4 -3 1 0 -3 -3 -1 -2 -2 3 0 0 0 0 0 0 0 0 0 0 70 0 0 0 0 0 0 0 0 30 0.48 0.11 37 E -1 4 -1 0 -4 1 5 -3 -1 -4 -3 1 -2 -4 -2 -1 -1 -3 -2 -3 0 41 0 0 0 0 59 0 0 0 0 0 0 0 0 0 0 0 0 0 0.68 0.11 38 E -1 2 0 1 -3 1 5 -2 -1 -3 -3 1 -2 -3 -2 2 0 -3 -2 -3 0 14 0 0 0 0 59 0 0 0 0 0 0 0 0 27 0 0 0 0 0.55 0.11 39 Y -2 -1 -2 -3 -3 -1 -1 -3 1 -1 -1 2 -1 2 -3 -2 -1 1 6 0 0 0 0 0 0 0 0 0 0 0 0 27 0 0 0 0 0 0 59 14 0.52 0.11 40 I -2 -3 -4 -4 -2 -3 -4 -4 -4 4 3 -3 1 0 -3 -3 -1 -3 -2 2 0 0 0 0 0 0 0 0 0 59 41 0 0 0 0 0 0 0 0 0 0.50 0.11 41 R -2 4 0 3 -4 1 1 -2 -1 -3 -3 3 -2 -4 -2 -1 -1 -4 -3 -3 0 34 0 30 0 0 0 0 0 0 0 36 0 0 0 0 0 0 0 0 0.56 0.11 42 K 0 1 0 -1 -3 1 0 -1 -1 -3 -3 4 -2 -3 -1 3 0 -3 -2 -3 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0 36 0 0 0 0 0.48 0.11 43 Y -2 -2 -3 -4 -2 -2 -3 -4 0 0 -1 -2 -1 2 -3 -2 -1 1 6 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 36 0.63 0.11 44 L -2 -2 -4 -4 -2 -2 -3 -4 -3 1 4 -3 2 0 -3 -3 -1 -2 -1 1 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0.53 0.05 45 P -1 -2 -2 -2 -3 -1 -1 -2 -2 -3 -3 -1 -3 -4 8 -1 -1 -4 -3 -3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 2.06 0.01 46 D -1 -2 1 4 -3 -1 0 4 -2 -4 -4 -1 -3 -4 -2 0 -1 -4 -3 -3 0 0 0 50 0 0 0 50 0 0 0 0 0 0 0 0 0 0 0 0 0.68 0.01 47 K -1 2 0 -1 -3 1 1 -2 -1 -3 -3 5 -2 -3 -1 0 -1 -3 -2 -2 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0.54 0.01 48 L -2 -2 -4 -4 -1 -2 -3 -4 -3 2 4 -3 2 0 -3 -3 -1 -2 -1 1 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0.48 0.01 K Lambda Standard Ungapped 0.1381 0.3183 Standard Gapped 0.0410 0.2670 PSI Ungapped 0.1624 0.3169 PSI Gapped 0.0497 0.2670