SILENT_MODE BLOCK_FILE jp_IVBi6BQ.concise.blc MAX_NSEQ 798 MAX_INPUT_LEN 800 OUTPUT_FILE jp_IVBi6BQ.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 115 787 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 788 115 797 H SPACE SUB_CHARS 1 788 115 797 E SPACE SUB_CHARS 1 788 115 797 - SPACE STRAND 38 791 42 COLOUR_TEXT_REGION 38 791 42 791 51 STRAND 48 791 52 COLOUR_TEXT_REGION 48 791 52 791 51 STRAND 72 791 75 COLOUR_TEXT_REGION 72 791 75 791 51 HELIX 6 791 14 COLOUR_TEXT_REGION 6 791 14 791 50 HELIX 19 791 32 COLOUR_TEXT_REGION 19 791 32 791 50 HELIX 92 791 100 COLOUR_TEXT_REGION 92 791 100 791 50 HELIX 104 791 113 COLOUR_TEXT_REGION 104 791 113 791 50 STRAND 37 796 42 COLOUR_TEXT_REGION 37 796 42 796 51 STRAND 48 796 53 COLOUR_TEXT_REGION 48 796 53 796 51 STRAND 72 796 75 COLOUR_TEXT_REGION 72 796 75 796 51 HELIX 6 796 14 COLOUR_TEXT_REGION 6 796 14 796 50 HELIX 19 796 32 COLOUR_TEXT_REGION 19 796 32 796 50 HELIX 80 796 85 COLOUR_TEXT_REGION 80 796 85 796 50 HELIX 92 796 100 COLOUR_TEXT_REGION 92 796 100 796 50 HELIX 104 796 113 COLOUR_TEXT_REGION 104 796 113 796 50 STRAND 38 797 42 COLOUR_TEXT_REGION 38 797 42 797 51 STRAND 50 797 51 COLOUR_TEXT_REGION 50 797 51 797 51 STRAND 73 797 75 COLOUR_TEXT_REGION 73 797 75 797 51 HELIX 5 797 15 COLOUR_TEXT_REGION 5 797 15 797 50 HELIX 19 797 33 COLOUR_TEXT_REGION 19 797 33 797 50 HELIX 91 797 100 COLOUR_TEXT_REGION 91 797 100 797 50 HELIX 104 797 113 COLOUR_TEXT_REGION 104 797 113 797 50