SILENT_MODE
BLOCK_FILE jp_xzp6mqU.concise.blc
MAX_NSEQ 302
MAX_INPUT_LEN 304
OUTPUT_FILE jp_xzp6mqU.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 108 291   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 292 108 301 H SPACE
SUB_CHARS 1 292 108 301 E SPACE
SUB_CHARS 1 292 108 301 - SPACE
STRAND 33 295 33
COLOUR_TEXT_REGION 33 295 33 295 51
HELIX 24 295 24
COLOUR_TEXT_REGION 24 295 24 295 50
HELIX 66 295 71
COLOUR_TEXT_REGION 66 295 71 295 50
HELIX 80 295 89
COLOUR_TEXT_REGION 80 295 89 295 50
HELIX 66 300 70
COLOUR_TEXT_REGION 66 300 70 300 50
HELIX 80 300 89
COLOUR_TEXT_REGION 80 300 89 300 50
STRAND 20 301 20
COLOUR_TEXT_REGION 20 301 20 301 51
STRAND 32 301 34
COLOUR_TEXT_REGION 32 301 34 301 51
HELIX 24 301 26
COLOUR_TEXT_REGION 24 301 26 301 50
HELIX 65 301 71
COLOUR_TEXT_REGION 65 301 71 301 50
HELIX 79 301 89
COLOUR_TEXT_REGION 79 301 89 301 50