SILENT_MODE BLOCK_FILE jp_WiTh17u.concise.blc MAX_NSEQ 568 MAX_INPUT_LEN 570 OUTPUT_FILE jp_WiTh17u.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 127 557 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 558 127 567 H SPACE SUB_CHARS 1 558 127 567 E SPACE SUB_CHARS 1 558 127 567 - SPACE STRAND 7 561 7 COLOUR_TEXT_REGION 7 561 7 561 51 STRAND 14 561 19 COLOUR_TEXT_REGION 14 561 19 561 51 STRAND 46 561 52 COLOUR_TEXT_REGION 46 561 52 561 51 STRAND 76 561 91 COLOUR_TEXT_REGION 76 561 91 561 51 STRAND 101 561 106 COLOUR_TEXT_REGION 101 561 106 561 51 STRAND 110 561 114 COLOUR_TEXT_REGION 110 561 114 561 51 STRAND 119 561 125 COLOUR_TEXT_REGION 119 561 125 561 51 HELIX 23 561 37 COLOUR_TEXT_REGION 23 561 37 561 50 HELIX 56 561 72 COLOUR_TEXT_REGION 56 561 72 561 50 STRAND 7 566 8 COLOUR_TEXT_REGION 7 566 8 566 51 STRAND 14 566 19 COLOUR_TEXT_REGION 14 566 19 566 51 STRAND 46 566 52 COLOUR_TEXT_REGION 46 566 52 566 51 STRAND 76 566 91 COLOUR_TEXT_REGION 76 566 91 566 51 STRAND 101 566 106 COLOUR_TEXT_REGION 101 566 106 566 51 STRAND 110 566 114 COLOUR_TEXT_REGION 110 566 114 566 51 STRAND 118 566 124 COLOUR_TEXT_REGION 118 566 124 566 51 HELIX 23 566 36 COLOUR_TEXT_REGION 23 566 36 566 50 HELIX 56 566 73 COLOUR_TEXT_REGION 56 566 73 566 50 STRAND 14 567 19 COLOUR_TEXT_REGION 14 567 19 567 51 STRAND 46 567 53 COLOUR_TEXT_REGION 46 567 53 567 51 STRAND 76 567 91 COLOUR_TEXT_REGION 76 567 91 567 51 STRAND 102 567 106 COLOUR_TEXT_REGION 102 567 106 567 51 STRAND 110 567 114 COLOUR_TEXT_REGION 110 567 114 567 51 STRAND 119 567 126 COLOUR_TEXT_REGION 119 567 126 567 51 HELIX 23 567 37 COLOUR_TEXT_REGION 23 567 37 567 50 HELIX 57 567 72 COLOUR_TEXT_REGION 57 567 72 567 50