SILENT_MODE BLOCK_FILE jp_FqUVGut.concise.blc MAX_NSEQ 114 MAX_INPUT_LEN 116 OUTPUT_FILE jp_FqUVGut.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 740 103 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 104 740 113 H SPACE SUB_CHARS 1 104 740 113 E SPACE SUB_CHARS 1 104 740 113 - SPACE STRAND 3 107 5 COLOUR_TEXT_REGION 3 107 5 107 51 STRAND 125 107 127 COLOUR_TEXT_REGION 125 107 127 107 51 STRAND 400 107 403 COLOUR_TEXT_REGION 400 107 403 107 51 STRAND 502 107 504 COLOUR_TEXT_REGION 502 107 504 107 51 STRAND 595 107 595 COLOUR_TEXT_REGION 595 107 595 107 51 STRAND 608 107 610 COLOUR_TEXT_REGION 608 107 610 107 51 STRAND 615 107 619 COLOUR_TEXT_REGION 615 107 619 107 51 STRAND 706 107 706 COLOUR_TEXT_REGION 706 107 706 107 51 HELIX 24 107 27 COLOUR_TEXT_REGION 24 107 27 107 50 HELIX 32 107 40 COLOUR_TEXT_REGION 32 107 40 107 50 HELIX 53 107 84 COLOUR_TEXT_REGION 53 107 84 107 50 HELIX 88 107 92 COLOUR_TEXT_REGION 88 107 92 107 50 HELIX 102 107 106 COLOUR_TEXT_REGION 102 107 106 107 50 HELIX 108 107 109 COLOUR_TEXT_REGION 108 107 109 107 50 HELIX 112 107 114 COLOUR_TEXT_REGION 112 107 114 107 50 HELIX 128 107 138 COLOUR_TEXT_REGION 128 107 138 107 50 HELIX 143 107 209 COLOUR_TEXT_REGION 143 107 209 107 50 HELIX 214 107 214 COLOUR_TEXT_REGION 214 107 214 107 50 HELIX 234 107 241 COLOUR_TEXT_REGION 234 107 241 107 50 HELIX 252 107 252 COLOUR_TEXT_REGION 252 107 252 107 50 HELIX 276 107 316 COLOUR_TEXT_REGION 276 107 316 107 50 HELIX 327 107 360 COLOUR_TEXT_REGION 327 107 360 107 50 HELIX 372 107 399 COLOUR_TEXT_REGION 372 107 399 107 50 HELIX 408 107 410 COLOUR_TEXT_REGION 408 107 410 107 50 HELIX 412 107 421 COLOUR_TEXT_REGION 412 107 421 107 50 HELIX 424 107 451 COLOUR_TEXT_REGION 424 107 451 107 50 HELIX 468 107 480 COLOUR_TEXT_REGION 468 107 480 107 50 HELIX 520 107 539 COLOUR_TEXT_REGION 520 107 539 107 50 HELIX 577 107 594 COLOUR_TEXT_REGION 577 107 594 107 50 HELIX 596 107 604 COLOUR_TEXT_REGION 596 107 604 107 50 HELIX 629 107 640 COLOUR_TEXT_REGION 629 107 640 107 50 HELIX 643 107 648 COLOUR_TEXT_REGION 643 107 648 107 50 HELIX 655 107 676 COLOUR_TEXT_REGION 655 107 676 107 50 HELIX 681 107 695 COLOUR_TEXT_REGION 681 107 695 107 50 HELIX 707 107 738 COLOUR_TEXT_REGION 707 107 738 107 50 STRAND 3 112 5 COLOUR_TEXT_REGION 3 112 5 112 51 STRAND 124 112 127 COLOUR_TEXT_REGION 124 112 127 112 51 STRAND 263 112 265 COLOUR_TEXT_REGION 263 112 265 112 51 STRAND 400 112 403 COLOUR_TEXT_REGION 400 112 403 112 51 STRAND 503 112 503 COLOUR_TEXT_REGION 503 112 503 112 51 STRAND 594 112 597 COLOUR_TEXT_REGION 594 112 597 112 51 STRAND 615 112 618 COLOUR_TEXT_REGION 615 112 618 112 51 HELIX 13 112 16 COLOUR_TEXT_REGION 13 112 16 112 50 HELIX 24 112 26 COLOUR_TEXT_REGION 24 112 26 112 50 HELIX 34 112 37 COLOUR_TEXT_REGION 34 112 37 112 50 HELIX 53 112 85 COLOUR_TEXT_REGION 53 112 85 112 50 HELIX 88 112 91 COLOUR_TEXT_REGION 88 112 91 112 50 HELIX 102 112 109 COLOUR_TEXT_REGION 102 112 109 112 50 HELIX 112 112 114 COLOUR_TEXT_REGION 112 112 114 112 50 HELIX 128 112 138 COLOUR_TEXT_REGION 128 112 138 112 50 HELIX 142 112 215 COLOUR_TEXT_REGION 142 112 215 112 50 HELIX 234 112 242 COLOUR_TEXT_REGION 234 112 242 112 50 HELIX 249 112 253 COLOUR_TEXT_REGION 249 112 253 112 50 HELIX 275 112 316 COLOUR_TEXT_REGION 275 112 316 112 50 HELIX 327 112 362 COLOUR_TEXT_REGION 327 112 362 112 50 HELIX 372 112 396 COLOUR_TEXT_REGION 372 112 396 112 50 HELIX 398 112 399 COLOUR_TEXT_REGION 398 112 399 112 50 HELIX 407 112 420 COLOUR_TEXT_REGION 407 112 420 112 50 HELIX 426 112 426 COLOUR_TEXT_REGION 426 112 426 112 50 HELIX 428 112 452 COLOUR_TEXT_REGION 428 112 452 112 50 HELIX 464 112 471 COLOUR_TEXT_REGION 464 112 471 112 50 HELIX 474 112 479 COLOUR_TEXT_REGION 474 112 479 112 50 HELIX 520 112 539 COLOUR_TEXT_REGION 520 112 539 112 50 HELIX 542 112 544 COLOUR_TEXT_REGION 542 112 544 112 50 HELIX 576 112 593 COLOUR_TEXT_REGION 576 112 593 112 50 HELIX 598 112 604 COLOUR_TEXT_REGION 598 112 604 112 50 HELIX 629 112 640 COLOUR_TEXT_REGION 629 112 640 112 50 HELIX 643 112 648 COLOUR_TEXT_REGION 643 112 648 112 50 HELIX 655 112 677 COLOUR_TEXT_REGION 655 112 677 112 50 HELIX 681 112 695 COLOUR_TEXT_REGION 681 112 695 112 50 HELIX 706 112 738 COLOUR_TEXT_REGION 706 112 738 112 50 STRAND 2 113 5 COLOUR_TEXT_REGION 2 113 5 113 51 STRAND 59 113 61 COLOUR_TEXT_REGION 59 113 61 113 51 STRAND 103 113 104 COLOUR_TEXT_REGION 103 113 104 113 51 STRAND 126 113 127 COLOUR_TEXT_REGION 126 113 127 113 51 STRAND 253 113 253 COLOUR_TEXT_REGION 253 113 253 113 51 STRAND 277 113 279 COLOUR_TEXT_REGION 277 113 279 113 51 STRAND 290 113 294 COLOUR_TEXT_REGION 290 113 294 113 51 STRAND 299 113 300 COLOUR_TEXT_REGION 299 113 300 113 51 STRAND 389 113 390 COLOUR_TEXT_REGION 389 113 390 113 51 STRAND 402 113 403 COLOUR_TEXT_REGION 402 113 403 113 51 STRAND 449 113 450 COLOUR_TEXT_REGION 449 113 450 113 51 STRAND 502 113 505 COLOUR_TEXT_REGION 502 113 505 113 51 STRAND 606 113 610 COLOUR_TEXT_REGION 606 113 610 113 51 STRAND 616 113 620 COLOUR_TEXT_REGION 616 113 620 113 51 STRAND 629 113 629 COLOUR_TEXT_REGION 629 113 629 113 51 STRAND 704 113 709 COLOUR_TEXT_REGION 704 113 709 113 51 HELIX 24 113 28 COLOUR_TEXT_REGION 24 113 28 113 50 HELIX 30 113 41 COLOUR_TEXT_REGION 30 113 41 113 50 HELIX 68 113 81 COLOUR_TEXT_REGION 68 113 81 113 50 HELIX 89 113 93 COLOUR_TEXT_REGION 89 113 93 113 50 HELIX 101 113 102 COLOUR_TEXT_REGION 101 113 102 113 50 HELIX 111 113 114 COLOUR_TEXT_REGION 111 113 114 113 50 HELIX 130 113 137 COLOUR_TEXT_REGION 130 113 137 113 50 HELIX 143 113 168 COLOUR_TEXT_REGION 143 113 168 113 50 HELIX 174 113 184 COLOUR_TEXT_REGION 174 113 184 113 50 HELIX 190 113 193 COLOUR_TEXT_REGION 190 113 193 113 50 HELIX 202 113 207 COLOUR_TEXT_REGION 202 113 207 113 50 HELIX 235 113 240 COLOUR_TEXT_REGION 235 113 240 113 50 HELIX 280 113 280 COLOUR_TEXT_REGION 280 113 280 113 50 HELIX 282 113 289 COLOUR_TEXT_REGION 282 113 289 113 50 HELIX 310 113 316 COLOUR_TEXT_REGION 310 113 316 113 50 HELIX 328 113 355 COLOUR_TEXT_REGION 328 113 355 113 50 HELIX 367 113 369 COLOUR_TEXT_REGION 367 113 369 113 50 HELIX 372 113 385 COLOUR_TEXT_REGION 372 113 385 113 50 HELIX 391 113 401 COLOUR_TEXT_REGION 391 113 401 113 50 HELIX 414 113 439 COLOUR_TEXT_REGION 414 113 439 113 50 HELIX 470 113 481 COLOUR_TEXT_REGION 470 113 481 113 50 HELIX 521 113 537 COLOUR_TEXT_REGION 521 113 537 113 50 HELIX 577 113 605 COLOUR_TEXT_REGION 577 113 605 113 50 HELIX 631 113 641 COLOUR_TEXT_REGION 631 113 641 113 50 HELIX 643 113 648 COLOUR_TEXT_REGION 643 113 648 113 50 HELIX 655 113 660 COLOUR_TEXT_REGION 655 113 660 113 50 HELIX 662 113 675 COLOUR_TEXT_REGION 662 113 675 113 50 HELIX 681 113 694 COLOUR_TEXT_REGION 681 113 694 113 50 HELIX 710 113 738 COLOUR_TEXT_REGION 710 113 738 113 50