SILENT_MODE
BLOCK_FILE jp_pQqz8eT.concise.blc
MAX_NSEQ 64
MAX_INPUT_LEN 66
OUTPUT_FILE jp_pQqz8eT.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 138 53   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 54 138 63 H SPACE
SUB_CHARS 1 54 138 63 E SPACE
SUB_CHARS 1 54 138 63 - SPACE
STRAND 18 57 18
COLOUR_TEXT_REGION 18 57 18 57 51
STRAND 26 57 32
COLOUR_TEXT_REGION 26 57 32 57 51
STRAND 39 57 40
COLOUR_TEXT_REGION 39 57 40 57 51
STRAND 56 57 58
COLOUR_TEXT_REGION 56 57 58 57 51
STRAND 80 57 85
COLOUR_TEXT_REGION 80 57 85 57 51
STRAND 91 57 95
COLOUR_TEXT_REGION 91 57 95 57 51
STRAND 126 57 130
COLOUR_TEXT_REGION 126 57 130 57 51
HELIX 45 57 50
COLOUR_TEXT_REGION 45 57 50 57 50
HELIX 60 57 72
COLOUR_TEXT_REGION 60 57 72 57 50
STRAND 17 62 19
COLOUR_TEXT_REGION 17 62 19 62 51
STRAND 26 62 32
COLOUR_TEXT_REGION 26 62 32 62 51
STRAND 39 62 41
COLOUR_TEXT_REGION 39 62 41 62 51
STRAND 80 62 85
COLOUR_TEXT_REGION 80 62 85 62 51
STRAND 91 62 95
COLOUR_TEXT_REGION 91 62 95 62 51
STRAND 127 62 130
COLOUR_TEXT_REGION 127 62 130 62 51
HELIX 45 62 50
COLOUR_TEXT_REGION 45 62 50 62 50
HELIX 56 62 58
COLOUR_TEXT_REGION 56 62 58 62 50
HELIX 60 62 73
COLOUR_TEXT_REGION 60 62 73 62 50
HELIX 109 62 118
COLOUR_TEXT_REGION 109 62 118 62 50
STRAND 25 63 31
COLOUR_TEXT_REGION 25 63 31 63 51
STRAND 55 63 58
COLOUR_TEXT_REGION 55 63 58 63 51
STRAND 76 63 76
COLOUR_TEXT_REGION 76 63 76 63 51
STRAND 80 63 85
COLOUR_TEXT_REGION 80 63 85 63 51
STRAND 91 63 95
COLOUR_TEXT_REGION 91 63 95 63 51
STRAND 125 63 130
COLOUR_TEXT_REGION 125 63 130 63 51
HELIX 38 63 40
COLOUR_TEXT_REGION 38 63 40 63 50
HELIX 43 63 43
COLOUR_TEXT_REGION 43 63 43 63 50
HELIX 45 63 50
COLOUR_TEXT_REGION 45 63 50 63 50
HELIX 61 63 72
COLOUR_TEXT_REGION 61 63 72 63 50