QUERY : TTLTGQPPLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYDP : QUERY
UniRef90_D8TBL2 : ----TPSPIFGGSTGGLLRKAQVEEFYVITWESGKEQIFEMPTGGAAIMRSGPNLLKLARKEQCLALGTQLRSKFKI-NYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRKGVGVNLRSIGKNCNPVDLKFTGKAAYD- : UniRef90_D8TBL2
UniRef90_UPI00036576AD : -TLTGQAPLFGGSTGGLLTKALVEEKYAITWSSPKEQVFEMPMCGAAKMRQGDNLLYLARKEHCLALGGQLRTKFKITNYKIYRVFPNGEIQYLHPADGVFPEKVNEGRVAVNSVPRNIGSNPEPAKLKFSGRLPYDP : UniRef90_UPI00036576AD
UniRef90_K9VQ57 : -ELTGQPPLFGGSTGGLLTKALVEEKYAITWTSPKEQVFEMPSGGAAIMRQGDNLLHLPRKEQCIALGGQLRAKFKITNYKIYRVFPDGSTEYLHPKDGVFPEKVNEGRPYNGKIDRNIGSNPNPIKVKFTGKKTYDP : UniRef90_K9VQ57
UniRef90_L8M104 : -TLSGTMPKFGGSTGGLLTAAEVEEKYAITWTSSKEQVFEMPTGGAAIMNSGENLLYLARKEQCLALGTQLRTKFKIQDYKVYRVFPNGETEYLHPADGVFPEKVNEGRPFAGKIDRKIGDNPEPSTLKFSGRTSYD- : UniRef90_L8M104
UniRef90_Q9T4W8 : --LNAPTPIFGGSTGGLLRKAEVEEFYSITWTGKSETVFELPTGGAAIMRAGENLLRLARKEQCIALGAQLKDKFKITDYKIYRVYPSGEVQFLHPKDGVFPEKVNPGRVAVGSNKRRIGQNPDPAKLKFKGQETFD- : UniRef90_Q9T4W8
UniRef90_M4ITU7 : ----MPSPTFGGSTGGWLRSAEVEEKYAITWNSKKEQIFEMPTGGAAIMREDDNLLYLSRKEQCLALSSQLLSKFKIRDCKIYRIFPSGEVQYLHPKDGVVPEKVNSGRIGVGNIDHSIGKNTEPVNKKFTGQNTYE- : UniRef90_M4ITU7
UniRef90_P51279 : --LNMPSPTFGGSTGGWLRAAEVEEKYAITWTGKNESKFEMPTGGTATMRDGENLLYLAKKEQCLALGTQLKGKFKISDYKIYRVFPNGEVQYLHPKDGVFPEKVNAGRASINSVDHSIGKNVNPINVKFTNKATYD- : UniRef90_P51279
UniRef90_C6KIK0 : -----QTPLFGGSTGGWLRAAQIEEKYAITWSSSKSQIFEMPTGGAAIMRTGQNLLYLARKEQCLALGTQLRT-FKITDYKIYRIFPSGEVQYLHPKDGVFPEKSNEGRVQANNRQFSIGKNPNPVAVKFSGKGTFE- : UniRef90_C6KIK0
UniRef90_UPI000344F5B2 : -TLTGKTPAFGGSTGGLLKKADLEEKYAITWTSSTEQVFEMPTGGAATMNAGENLLYLARKEQCLALGRQLRTKFKMADYKIYRVFPTGDVEYLHPKDGVFPEKVNEGRSAVNSVAHSIGHNVEPAAVKFTGKETFD- : UniRef90_UPI000344F5B2
UniRef90_K9TS33 : -TLTGQAPKFGGSTGGLLSKALVEEKYAITWTSSKEQVFEMPSGGAAVMNAGENLLYLPRKEHCLALGTQFRTKFKIEDYKIYRVYASGETEYLHPKDGVFPEKVNEGRAYYGKNDRKIGDNPQPAKIKFSGKKPYDP : UniRef90_K9TS33
UniRef90_B4WFP8 : -ALTGSMPKFGGSTGGLLTAAFVEERYAITWTSSKEQVFEMPTGGAATMNEGENLLELARKEQCLALGAQLRTKFKITDYKIYRIFPNGETTFIHPADGVFPEKVNEGRGYSGKKDRRIGENPNPATIKFSGQNTFE- : UniRef90_B4WFP8
UniRef90_UPI0003055AD9 : -TLSGQTPIFGGSTGGLLAKAEREEKYAITWTSPKEQPFEMPTGGTAIMRQGENLLYLARKEYGIYLGGQVFRKLKITNYKVYRIYPNGEIQYIHPADGVFPEKVNPGREKVRYVDRNIGKNPSPAAVKFSGTATYD- : UniRef90_UPI0003055AD9
UniRef90_Q85FY0 : --LKMPSPSFLGSTGGWLRCAETEEKYAMTWSSDQQHIFEMPTGGAAVMNSGDNLLYLARKEQALALATQLRTQFKIQDYKIYRIFPSGEVQYLHPKDGVLPYQVNKGREQVGRVKSTIGKNVNPAQVKFTSKATYD- : UniRef90_Q85FY0
UniRef90_I0YVS7 : ---STPSPIFGGSTGGLLRKAQIEEFYVITWDAKKEQVFEMPTGGAAIMRSGPNLLKLARKEQCLALLTQLRNKFK-TDGQIYRVFPDGEVQYLHPKDGVYPEKVNAGRTAVGAKDRSIGKNTNPVAVKFTGKGTYD- : UniRef90_I0YVS7
UniRef90_K9U8Z5 : --LTGKTPIFGGSTGGLLSKADVEEKYAITWNSPKEQVFEMPTGGAATMVSGDNLLNFARKEQCLALGGQLR-KYKINNYKVYRILPKGEITLLHPKDGVFPEKVNAGREFNGKVDRNIGSNPNPATLKFSGKRTID- : UniRef90_K9U8Z5
UniRef90_P23076 : -TLTGKTPVFGGSTGGLLKSAETEEKYAITWTSTKEQVFELPTGGAAVMHEGDNLLYFARKEQALALGTQLRTKFKIESYKIYRFFPGADVGYLHPKDGVFPEKVNEGRSFAGKVDRRIGQNPNPATIKFTGKQPY-- : UniRef90_P23076
UniRef90_A2CBZ6 : TALTGQYPKYLGSTGGLLNSAETEEKYAITWSSSTAQAFELPTGGAAEMNEGENLMYFARKEQCLALGTQLRTKPKIEDYKIYRVFPGGDTEFLHPKDGVFPEKVNEGRVMVNVNNRRIGENANPAKLKFSGRNTYD- : UniRef90_A2CBZ6
UniRef90_K9XBX8 : -ELSGQTPIFGGSTGGLLTKAFREEKYVITWTSPKQQVFEMPTGGTAIMQQGPNKLELARKEYCIALGGQLRTKFRITDYKIYRVYPNGEVQYLHPSDGVFPEKVNEGRQKVGYVDRNIGKNPDPAKLKFSGMTTYN- : UniRef90_K9XBX8
UniRef90_K9WZP8 : --LSGQTPLYGGSTGGLLSKAEQEEKYAITWTSAKEQVFELPTGGAATMRKGENLLYLARKEQGIALGGQLR-KFKITDYKIYRILPKGETTLIHPADGVFPEKVNPGRDKVRYVPRRIGQNPSPAQLKFSGKATHD- : UniRef90_K9WZP8
UniRef90_B1XQE5 : -ELTGKTPKFGGSTGGLLAAAEREEKYAITWSSAKEQVFELPTGGAAVMNEGDNLMYFARKEQCLALGTQLKTQFKITDYKIYRVFPSGETQFLYPLDGVPSEKVNEGREYKGKVDRNIGSNPEPATLKFSGVAPYE- : UniRef90_B1XQE5
UniRef90_U9VYG7 : -EITGKTPIFGGSTGGLLSAAEKEEKYVITWSSKKEQPFEMPTGGVAIMNEGENMLYLARKEQCLALSRQLKTKFKITDYKIYRVLPTGETTYLHPADGVPPEKVNQGREYNGKIDRSIGKNPNPATIKFSGKEPYE- : UniRef90_U9VYG7
UniRef90_E3UIU3 : --LKMPSPSFGGSTGGWLRSAENEEKYAITWISKNEEVFEMPTAGAALMRSGENLLYFARKEQCLSLGTQLKTQFKIDNYKIYRVFPNGEIQYLHPKDGVFPEKVNEGRKAINTLTRSIGKNPDPVVVKFINKQTFE- : UniRef90_E3UIU3
UniRef90_UPI00047169F1 : --LNGQLPAYVGSTGGLLDAAETEEKYAITWTSKKEQAFELPTGGAALMHSGENIMYFARKEQCLALGASLRTRPRINDYKIYRIFPGGDTEYLHPKDGVFPEKVNEGRPVVNHNPRSIGSNVNPATIKFAGKKVYD- : UniRef90_UPI00047169F1
UniRef90_K9RCC9 : -TLSGQTPLFGGSTGGLLKKAVEEEKYAITWTSPKQQVFEMPTGGAATMLEGENMLEIARKEYGIALGAQFR-KMKITDYKIYRIYPSGETQYLHPADGVFPEKVNEGREKVRFNARKIGDNPSAAKLKFSGVAPYD- : UniRef90_K9RCC9
UniRef90_X5JEV6 : --------MFAGSTGGLLKAAEEEEKYAITWTGKKEQVFEMPTGGAAVMNAGENLLYLARKEQCLALGAQLR-KLKITDYNIYRIAPGGASTLLHPADGVFPEKVNEGRAPVRFVPRNIGSNPNPSQIKFSGKATHD- : UniRef90_X5JEV6
UniRef90_Q7NF26 : ----GSTPLFGGSTGGLLRKAQIEEKYLIVWNSKEEQVFEMPTGGAATMVAGTNVLYLARKEQCHALHRQLVSTFKIRDSKIYRVYPNGEQVLIFPMDGVPSEKSNPGREVVGYVPRKIGDNPNPVDVKFTGKETFD- : UniRef90_Q7NF26
UniRef90_Q39615 : ----TPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTGGAAIMRQGPNLLKFGKKEQCLALTTQLRNKFKLTPC-FYRVFPDGKVQYLHPADGVYPEKVNAGRVGANQNMRRIGQNVNPIKVKFSGR----- : UniRef90_Q39615
UniRef90_UPI00037D361F : --------MWPGSTGGLLASANTEEKYVITWSSPKQQVFEMPTGGAATMHSGDNMLYLAKKEQALALGTQLR-KFKINNYKIWREFPNGDQVYLHPADGVFPEKVNAGRAAVNSVSRKIGDNPNPISVKFTGKATHD- : UniRef90_UPI00037D361F
UniRef90_D1J785 : ------MPIFGGSTGGWLRSAEFEEKYVITWNSPKEQLFEMPTAGTALMLLGQNLLYLARKEQCLALGTQLR-KFKIKDYKIYRIFPGGEIQFLHPKDGVFPETSNEGRVPVGKRDFSIGKNPNPASIKW-------- : UniRef90_D1J785
UniRef90_C1N6J0 : ---NTPSPIFGGSTGGLLRKAQVEEFYVLTWEAPKEMIFEMPTGGAAIMRKGPNLLKLARKEQCLALLNSMRAKNKINGC-VYRVFPSGEVQYLHPKDGVYPEKVNKGRVGANNNMRSIGKNANPASIKFGGK----- : UniRef90_C1N6J0
UniRef90_Q9TLR2 : --LKMPSPEFYGNTGGWLRSSDIEEKYAITWSSKNEDIFEIPTGGVAKMKAGDNLLYLAKKEQCLALGNQLKIKFKILNFKIYRIFPNGEAQFLHPKDGVFPEKVNEGRKPIGKIDHNIGKNLNPAEVKFTHKTIF-- : UniRef90_Q9TLR2
UniRef90_UPI00034D6561 : TIADAKTPIFGGTTGGLLSAAEREEKYCITWTGKAGQVFEMPTSGAAVMVEGTNCIYLPRKETCLALGAQLR-DYKIKDYKIYRILPGEEPVLVHPKDGVFPEKSNEGREMINKVDRNLGNNPEPVTVKFSDRETYDP : UniRef90_UPI00034D6561
UniRef90_M1KFT6 : ---SATSPTFGGGTGGWLTAGETEEKYAMTWTGKDEKIFEMPTGGAAIMKKGENLIYFARKEQCLALSSQLRTKFKVIDYKIYRVFGTGEIQHLHPKDGTFPEKVNEGRIGVNNVNHSIGKNLEPAKIKYSTK----- : UniRef90_M1KFT6
UniRef90_D3ENF4 : --LKGKLPIFGGSTGGLLSSAYLEEKYAITWSSGTEQVFEMPTGGAAIMNVGANLLHLATKEQCLALGKQLQTKFEIESYKVYRVFPDGNAQLLYPIDGVASEVAKEGRSYAGKVDRKIGANPEPVTLKFSDKAPYE- : UniRef90_D3ENF4
UniRef90_Q2JJH3 : ----AKLPLFGGSTGGLLSAAETEEKYVITWTGKPGQVFEMPTGGAAEMVEGKNFLTFARKEQCLALGAQLRSDYKINDYQIFRIPAGGEPVLVHPKDGVFPEKVNEGREPVGKVDRNIGKNKEPITYKFTGGKPWD- : UniRef90_Q2JJH3
UniRef90_A2C520 : --LPGTLPKHIGSTGGLLNSAETEEKYAITWTSKTSGVFELPTGGAAVMHEGDNLMYFARKEQCFALNTQLRGKPRIETSKIYRIYPGGDRELLFPKDGVFSEKPNEGRLKEGYNNRRIGENPNPASLKFSGKKTYD- : UniRef90_A2C520
UniRef90_K9UY03 : --LKGKAPLFGGGTGGLLTKAEVEEKYAITWTSPKKQVFELPTGGVATMNEGENLLYIARKEYGIFLGGQQLRKMKITDYKIYRILPNGETTKIHPADGNFPEKVTEGRQKVGAIPRRIGENPSAAKIKFSGKKPYD- : UniRef90_K9UY03
UniRef90_K9ZXL1 : -------PKFEGSTGGWLSAAKNEEKYVIIWTSKDASLFEMPTGGTAKMNAGNNVAYFARKEQCLALGTQLR-KFKITNYKIFRIYPPLDITLLHPFDGVFPEKVNEGRSPVGKRDASIGGNPNPASLKFQSNN---- : UniRef90_K9ZXL1
UniRef90_K9SEV0 : --------------------ASTEEKYLITWTSKKEQVFEMPTAGAATMHAGANILSFAKKEQALALGTQLR-KFKITDYRISREFPNGDTVHLHPKDGVFPERVNEGREQVGTKMRKIGDNPNPISVKFTDNATHD- : UniRef90_K9SEV0
UniRef90_G7ID69 : ---NTPSPIFS-------------EFHVITWDSPKEQIFEIANGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI-KYQFYRVFPNGEVQYLHPKDGVYPEKVNLGRQGVGQNFGSIGKNVSPIEVKFSGKQVYE- : UniRef90_G7ID69
UniRef90_D9IXR8 : ------------GTGGWLRTGGEEERYVITWASPRTQLFELPTGGCEFMRQGKNLITFARKEQCISIGKQLRTNFKINDYKIFRVLPNGQVVLLHPKDGVFPEKVNTGRVLVGAMEANIGK----------------- : UniRef90_D9IXR8
UniRef90_B5A4J0 : ---NTPMPRFQGNTGGLLRSASFQEFYAITFESPKEQIFEMPTGGAAEMRKGPNLVKFARKEQCLALLTQLRTKFKING-NIYRIAAGGEVTHLHPKDGIYPEKVHPGAATSRGPPK--------------------- : UniRef90_B5A4J0
UniRef90_Q9M713 : ---------------------------------------------SAIMREGPNLLKLARKEQCLALGTRLRSKYKIT-YQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNFRSIGKNVNPIDVKFTGKSTFD- : UniRef90_Q9M713
UniRef90_A0A059B3I6 : ---NTPSPIFSGSTDGLLCKAP-------------EQIFEMPMGGIAIVRQGPNPLKLARKEQCLALGTRLRSKYKI-KYQFYRVLPNG-------------KKVNLGREVMGQNLRSIGKNVSPIEVKFTGKQVDD- : UniRef90_A0A059B3I6
UniRef90_C3V6N7 : -ELTGKLPKYCESTGGLIDNRSYAETYAITWKSIKEQAFELPTGGAAIMHEGDNIMYFARKEQCLALGTQFKTKPKIKDYKIYRVYQNGEIEFLYPKDGVVS------------------------------------ : UniRef90_C3V6N7
UniRef90_A9LCB7 : ---------------------------------KKEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLWTKFKIQDYKIYRVYPSGEIQYLHPADGVFPEKV--------------------------------- : UniRef90_A9LCB7
UniRef90_W5FR95 : ------------------------------------------------MREGPNLLKLARKEQCLALGNRLRSKYKIA-YQFYRVFPNGEVQYLHPKDGVYPEKVNAGSSPARTPSRRI------------------- : UniRef90_W5FR95
UniRef90_R1DAM6 : --------------------------FVLMWFTPMPFVYESLYGGAEMCELGRHTVRLSTKQQALTLGSKMRKGNAAVTYSVYK-LGDGEMRLLYPKDGTFPEEAKDGR----------------------------- : UniRef90_R1DAM6
UniRef90_R1CQ80 : --------------------------------------YESLYGGAEMCELGRHTVRLSTKQQALTLGSKMRKGNAAVTYSVYK-LGDGEMRLL----GSYPKGVNA------------------------------- : UniRef90_R1CQ80
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121-------131----- :
OrigSeq : TTLTGQPPLYGGSTGGLLSAADTEEKYAITWTSPKEQVFEMPTAGAAVMREGENLVYFARKEQCLALAAQQLRPRKINDYKIYRIFPDGETVLIHPKDGVFPEKVNKGREAVNSVPRSIGQNPNPSQLKFTGKKPYDP : OrigSeq
Jnet : -----------------E-------EEEEEEE------EE----HHHHHH-----EEE-HHHHHHHHHHHHH-------EEEEEE-----EEEEE------------------------------EEEEE-------- : Jnet
jhmm : ----------------EEE------EEEEEEE------EEE---HHHHHH-----HHH-HHHHHHHHHHHHHH------EEEEEE-----EEEEE-------------HHHHHHHHHH--------EEEE-------- : jhmm
jpssm : ------------------------EEEEEEE------HHH--H-HHHHHH----EEEE--HHHHHHHHHHHH---E---EEEEEE-----EEEEE-----------------------------EEEEEE-------- : jpssm
Lupas 14 : ------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21 : ------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28 : ------------------------------------------------------------------------------------------------------------------------------------------ : Lupas 28
Jnet_25 : -------B-BBB-BBBBB--B---B-BBBBB-B----BBBBBBBBB-BB--B--BB-BB----BB-BB--B---B-B--B-BBBBB----B-BBBB--B-B---B--B---B------B------B-B-B-------- : Jnet_25
Jnet_5 : ----------------BB--------BBB--------B------BB--B------B-B-----B--B--------------BB-B--------B-------------------------------------------- : Jnet_5
Jnet_0 : --------------------------------------------B---B--------------B-----------------------------B-------------------------------------------- : Jnet_0
Jnet Rel : 898877776335676601166630157888507877411111212656523786022043789999999861186105506898648884688614777777777766211200113477777532887536778889 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.