SILENT_MODE BLOCK_FILE jp_US3JH3y.concise.blc MAX_NSEQ 171 MAX_INPUT_LEN 173 OUTPUT_FILE jp_US3JH3y.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 377 160 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 161 377 170 H SPACE SUB_CHARS 1 161 377 170 E SPACE SUB_CHARS 1 161 377 170 - SPACE STRAND 47 164 47 COLOUR_TEXT_REGION 47 164 47 164 51 STRAND 55 164 59 COLOUR_TEXT_REGION 55 164 59 164 51 STRAND 63 164 66 COLOUR_TEXT_REGION 63 164 66 164 51 STRAND 73 164 73 COLOUR_TEXT_REGION 73 164 73 164 51 STRAND 133 164 137 COLOUR_TEXT_REGION 133 164 137 164 51 STRAND 142 164 148 COLOUR_TEXT_REGION 142 164 148 164 51 STRAND 161 164 169 COLOUR_TEXT_REGION 161 164 169 164 51 STRAND 179 164 185 COLOUR_TEXT_REGION 179 164 185 164 51 STRAND 190 164 196 COLOUR_TEXT_REGION 190 164 196 164 51 STRAND 208 164 216 COLOUR_TEXT_REGION 208 164 216 164 51 STRAND 222 164 223 COLOUR_TEXT_REGION 222 164 223 164 51 STRAND 229 164 234 COLOUR_TEXT_REGION 229 164 234 164 51 STRAND 241 164 246 COLOUR_TEXT_REGION 241 164 246 164 51 STRAND 252 164 255 COLOUR_TEXT_REGION 252 164 255 164 51 STRAND 260 164 262 COLOUR_TEXT_REGION 260 164 262 164 51 STRAND 267 164 267 COLOUR_TEXT_REGION 267 164 267 164 51 STRAND 305 164 314 COLOUR_TEXT_REGION 305 164 314 164 51 STRAND 318 164 325 COLOUR_TEXT_REGION 318 164 325 164 51 STRAND 352 164 356 COLOUR_TEXT_REGION 352 164 356 164 51 HELIX 3 164 32 COLOUR_TEXT_REGION 3 164 32 164 50 STRAND 55 169 59 COLOUR_TEXT_REGION 55 169 59 169 51 STRAND 63 169 66 COLOUR_TEXT_REGION 63 169 66 169 51 STRAND 72 169 74 COLOUR_TEXT_REGION 72 169 74 169 51 STRAND 133 169 137 COLOUR_TEXT_REGION 133 169 137 169 51 STRAND 142 169 148 COLOUR_TEXT_REGION 142 169 148 169 51 STRAND 162 169 169 COLOUR_TEXT_REGION 162 169 169 169 51 STRAND 179 169 185 COLOUR_TEXT_REGION 179 169 185 169 51 STRAND 190 169 195 COLOUR_TEXT_REGION 190 169 195 169 51 STRAND 208 169 216 COLOUR_TEXT_REGION 208 169 216 169 51 STRAND 222 169 223 COLOUR_TEXT_REGION 222 169 223 169 51 STRAND 229 169 234 COLOUR_TEXT_REGION 229 169 234 169 51 STRAND 241 169 246 COLOUR_TEXT_REGION 241 169 246 169 51 STRAND 252 169 255 COLOUR_TEXT_REGION 252 169 255 169 51 STRAND 260 169 262 COLOUR_TEXT_REGION 260 169 262 169 51 STRAND 267 169 268 COLOUR_TEXT_REGION 267 169 268 169 51 STRAND 305 169 314 COLOUR_TEXT_REGION 305 169 314 169 51 STRAND 318 169 325 COLOUR_TEXT_REGION 318 169 325 169 51 STRAND 352 169 356 COLOUR_TEXT_REGION 352 169 356 169 51 HELIX 3 169 32 COLOUR_TEXT_REGION 3 169 32 169 50 STRAND 47 170 48 COLOUR_TEXT_REGION 47 170 48 170 51 STRAND 55 170 59 COLOUR_TEXT_REGION 55 170 59 170 51 STRAND 63 170 66 COLOUR_TEXT_REGION 63 170 66 170 51 STRAND 131 170 137 COLOUR_TEXT_REGION 131 170 137 170 51 STRAND 142 170 148 COLOUR_TEXT_REGION 142 170 148 170 51 STRAND 154 170 155 COLOUR_TEXT_REGION 154 170 155 170 51 STRAND 161 170 169 COLOUR_TEXT_REGION 161 170 169 170 51 STRAND 179 170 185 COLOUR_TEXT_REGION 179 170 185 170 51 STRAND 190 170 197 COLOUR_TEXT_REGION 190 170 197 170 51 STRAND 207 170 216 COLOUR_TEXT_REGION 207 170 216 170 51 STRAND 222 170 223 COLOUR_TEXT_REGION 222 170 223 170 51 STRAND 229 170 234 COLOUR_TEXT_REGION 229 170 234 170 51 STRAND 242 170 247 COLOUR_TEXT_REGION 242 170 247 170 51 STRAND 252 170 255 COLOUR_TEXT_REGION 252 170 255 170 51 STRAND 260 170 261 COLOUR_TEXT_REGION 260 170 261 170 51 STRAND 277 170 277 COLOUR_TEXT_REGION 277 170 277 170 51 STRAND 308 170 314 COLOUR_TEXT_REGION 308 170 314 170 51 STRAND 318 170 324 COLOUR_TEXT_REGION 318 170 324 170 51 STRAND 352 170 356 COLOUR_TEXT_REGION 352 170 356 170 51 HELIX 2 170 31 COLOUR_TEXT_REGION 2 170 31 170 50