SILENT_MODE BLOCK_FILE jp_wME0I5I.concise.blc MAX_NSEQ 675 MAX_INPUT_LEN 677 OUTPUT_FILE jp_wME0I5I.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 97 664 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 665 97 674 H SPACE SUB_CHARS 1 665 97 674 E SPACE SUB_CHARS 1 665 97 674 - SPACE STRAND 20 668 24 COLOUR_TEXT_REGION 20 668 24 668 51 STRAND 46 668 51 COLOUR_TEXT_REGION 46 668 51 668 51 STRAND 74 668 78 COLOUR_TEXT_REGION 74 668 78 668 51 STRAND 81 668 85 COLOUR_TEXT_REGION 81 668 85 668 51 HELIX 5 668 14 COLOUR_TEXT_REGION 5 668 14 668 50 HELIX 31 668 43 COLOUR_TEXT_REGION 31 668 43 668 50 HELIX 56 668 69 COLOUR_TEXT_REGION 56 668 69 668 50 STRAND 20 673 24 COLOUR_TEXT_REGION 20 673 24 673 51 STRAND 46 673 51 COLOUR_TEXT_REGION 46 673 51 673 51 STRAND 75 673 78 COLOUR_TEXT_REGION 75 673 78 673 51 STRAND 81 673 85 COLOUR_TEXT_REGION 81 673 85 673 51 HELIX 5 673 14 COLOUR_TEXT_REGION 5 673 14 673 50 HELIX 31 673 43 COLOUR_TEXT_REGION 31 673 43 673 50 HELIX 56 673 69 COLOUR_TEXT_REGION 56 673 69 673 50 STRAND 20 674 24 COLOUR_TEXT_REGION 20 674 24 674 51 STRAND 47 674 51 COLOUR_TEXT_REGION 47 674 51 674 51 STRAND 73 674 78 COLOUR_TEXT_REGION 73 674 78 674 51 STRAND 81 674 86 COLOUR_TEXT_REGION 81 674 86 674 51 HELIX 5 674 14 COLOUR_TEXT_REGION 5 674 14 674 50 HELIX 31 674 43 COLOUR_TEXT_REGION 31 674 43 674 50 HELIX 56 674 69 COLOUR_TEXT_REGION 56 674 69 674 50