SILENT_MODE BLOCK_FILE jp_wLRx0It.concise.blc MAX_NSEQ 879 MAX_INPUT_LEN 881 OUTPUT_FILE jp_wLRx0It.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 240 868 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 869 240 878 H SPACE SUB_CHARS 1 869 240 878 E SPACE SUB_CHARS 1 869 240 878 - SPACE STRAND 33 872 36 COLOUR_TEXT_REGION 33 872 36 872 51 STRAND 56 872 60 COLOUR_TEXT_REGION 56 872 60 872 51 STRAND 64 872 67 COLOUR_TEXT_REGION 64 872 67 872 51 STRAND 74 872 76 COLOUR_TEXT_REGION 74 872 76 872 51 STRAND 101 872 106 COLOUR_TEXT_REGION 101 872 106 872 51 STRAND 124 872 126 COLOUR_TEXT_REGION 124 872 126 872 51 STRAND 148 872 151 COLOUR_TEXT_REGION 148 872 151 872 51 STRAND 160 872 164 COLOUR_TEXT_REGION 160 872 164 872 51 STRAND 214 872 219 COLOUR_TEXT_REGION 214 872 219 872 51 STRAND 224 872 231 COLOUR_TEXT_REGION 224 872 231 872 51 HELIX 5 872 17 COLOUR_TEXT_REGION 5 872 17 872 50 HELIX 22 872 29 COLOUR_TEXT_REGION 22 872 29 872 50 HELIX 41 872 50 COLOUR_TEXT_REGION 41 872 50 872 50 HELIX 84 872 96 COLOUR_TEXT_REGION 84 872 96 872 50 HELIX 113 872 119 COLOUR_TEXT_REGION 113 872 119 872 50 HELIX 132 872 143 COLOUR_TEXT_REGION 132 872 143 872 50 HELIX 192 872 205 COLOUR_TEXT_REGION 192 872 205 872 50 STRAND 33 877 37 COLOUR_TEXT_REGION 33 877 37 877 51 STRAND 56 877 60 COLOUR_TEXT_REGION 56 877 60 877 51 STRAND 64 877 67 COLOUR_TEXT_REGION 64 877 67 877 51 STRAND 74 877 76 COLOUR_TEXT_REGION 74 877 76 877 51 STRAND 101 877 106 COLOUR_TEXT_REGION 101 877 106 877 51 STRAND 123 877 126 COLOUR_TEXT_REGION 123 877 126 877 51 STRAND 148 877 151 COLOUR_TEXT_REGION 148 877 151 877 51 STRAND 160 877 164 COLOUR_TEXT_REGION 160 877 164 877 51 STRAND 215 877 219 COLOUR_TEXT_REGION 215 877 219 877 51 STRAND 225 877 231 COLOUR_TEXT_REGION 225 877 231 877 51 HELIX 5 877 17 COLOUR_TEXT_REGION 5 877 17 877 50 HELIX 22 877 30 COLOUR_TEXT_REGION 22 877 30 877 50 HELIX 42 877 51 COLOUR_TEXT_REGION 42 877 51 877 50 HELIX 84 877 96 COLOUR_TEXT_REGION 84 877 96 877 50 HELIX 113 877 118 COLOUR_TEXT_REGION 113 877 118 877 50 HELIX 131 877 143 COLOUR_TEXT_REGION 131 877 143 877 50 HELIX 191 877 205 COLOUR_TEXT_REGION 191 877 205 877 50 STRAND 33 878 36 COLOUR_TEXT_REGION 33 878 36 878 51 STRAND 56 878 60 COLOUR_TEXT_REGION 56 878 60 878 51 STRAND 63 878 68 COLOUR_TEXT_REGION 63 878 68 878 51 STRAND 75 878 75 COLOUR_TEXT_REGION 75 878 75 878 51 STRAND 101 878 106 COLOUR_TEXT_REGION 101 878 106 878 51 STRAND 126 878 126 COLOUR_TEXT_REGION 126 878 126 878 51 STRAND 147 878 152 COLOUR_TEXT_REGION 147 878 152 878 51 STRAND 160 878 165 COLOUR_TEXT_REGION 160 878 165 878 51 STRAND 214 878 219 COLOUR_TEXT_REGION 214 878 219 878 51 STRAND 224 878 231 COLOUR_TEXT_REGION 224 878 231 878 51 HELIX 5 878 18 COLOUR_TEXT_REGION 5 878 18 878 50 HELIX 22 878 29 COLOUR_TEXT_REGION 22 878 29 878 50 HELIX 41 878 50 COLOUR_TEXT_REGION 41 878 50 878 50 HELIX 85 878 96 COLOUR_TEXT_REGION 85 878 96 878 50 HELIX 114 878 119 COLOUR_TEXT_REGION 114 878 119 878 50 HELIX 136 878 143 COLOUR_TEXT_REGION 136 878 143 878 50 HELIX 195 878 205 COLOUR_TEXT_REGION 195 878 205 878 50