SILENT_MODE BLOCK_FILE jp_965URV0.concise.blc MAX_NSEQ 1078 MAX_INPUT_LEN 1080 OUTPUT_FILE jp_965URV0.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 101 1067 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1068 101 1077 H SPACE SUB_CHARS 1 1068 101 1077 E SPACE SUB_CHARS 1 1068 101 1077 - SPACE STRAND 7 1071 10 COLOUR_TEXT_REGION 7 1071 10 1071 51 STRAND 43 1071 50 COLOUR_TEXT_REGION 43 1071 50 1071 51 STRAND 54 1071 60 COLOUR_TEXT_REGION 54 1071 60 1071 51 STRAND 90 1071 97 COLOUR_TEXT_REGION 90 1071 97 1071 51 HELIX 18 1071 38 COLOUR_TEXT_REGION 18 1071 38 1071 50 HELIX 68 1071 83 COLOUR_TEXT_REGION 68 1071 83 1071 50 STRAND 8 1076 9 COLOUR_TEXT_REGION 8 1076 9 1076 51 STRAND 43 1076 49 COLOUR_TEXT_REGION 43 1076 49 1076 51 STRAND 54 1076 61 COLOUR_TEXT_REGION 54 1076 61 1076 51 STRAND 90 1076 97 COLOUR_TEXT_REGION 90 1076 97 1076 51 HELIX 18 1076 39 COLOUR_TEXT_REGION 18 1076 39 1076 50 HELIX 68 1076 83 COLOUR_TEXT_REGION 68 1076 83 1076 50 STRAND 7 1077 10 COLOUR_TEXT_REGION 7 1077 10 1077 51 STRAND 43 1077 51 COLOUR_TEXT_REGION 43 1077 51 1077 51 STRAND 55 1077 56 COLOUR_TEXT_REGION 55 1077 56 1077 51 STRAND 89 1077 96 COLOUR_TEXT_REGION 89 1077 96 1077 51 HELIX 18 1077 38 COLOUR_TEXT_REGION 18 1077 38 1077 50 HELIX 68 1077 83 COLOUR_TEXT_REGION 68 1077 83 1077 50