SILENT_MODE BLOCK_FILE jp_yrQXnf4.concise.blc MAX_NSEQ 820 MAX_INPUT_LEN 822 OUTPUT_FILE jp_yrQXnf4.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 326 809 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 810 326 819 H SPACE SUB_CHARS 1 810 326 819 E SPACE SUB_CHARS 1 810 326 819 - SPACE STRAND 49 813 54 COLOUR_TEXT_REGION 49 813 54 813 51 STRAND 59 813 67 COLOUR_TEXT_REGION 59 813 67 813 51 STRAND 77 813 78 COLOUR_TEXT_REGION 77 813 78 813 51 STRAND 111 813 120 COLOUR_TEXT_REGION 111 813 120 813 51 STRAND 125 813 134 COLOUR_TEXT_REGION 125 813 134 813 51 STRAND 139 813 143 COLOUR_TEXT_REGION 139 813 143 813 51 STRAND 159 813 168 COLOUR_TEXT_REGION 159 813 168 813 51 STRAND 175 813 180 COLOUR_TEXT_REGION 175 813 180 813 51 STRAND 201 813 209 COLOUR_TEXT_REGION 201 813 209 813 51 STRAND 214 813 221 COLOUR_TEXT_REGION 214 813 221 813 51 STRAND 229 813 230 COLOUR_TEXT_REGION 229 813 230 813 51 STRAND 251 813 256 COLOUR_TEXT_REGION 251 813 256 813 51 STRAND 275 813 280 COLOUR_TEXT_REGION 275 813 280 813 51 STRAND 286 813 291 COLOUR_TEXT_REGION 286 813 291 813 51 STRAND 298 813 299 COLOUR_TEXT_REGION 298 813 299 813 51 STRAND 317 813 320 COLOUR_TEXT_REGION 317 813 320 813 51 HELIX 3 813 19 COLOUR_TEXT_REGION 3 813 19 813 50 HELIX 24 813 42 COLOUR_TEXT_REGION 24 813 42 813 50 HELIX 86 813 109 COLOUR_TEXT_REGION 86 813 109 813 50 HELIX 183 813 193 COLOUR_TEXT_REGION 183 813 193 813 50 HELIX 195 813 197 COLOUR_TEXT_REGION 195 813 197 813 50 HELIX 231 813 247 COLOUR_TEXT_REGION 231 813 247 813 50 HELIX 261 813 268 COLOUR_TEXT_REGION 261 813 268 813 50 HELIX 305 813 313 COLOUR_TEXT_REGION 305 813 313 813 50 STRAND 49 818 54 COLOUR_TEXT_REGION 49 818 54 818 51 STRAND 59 818 68 COLOUR_TEXT_REGION 59 818 68 818 51 STRAND 75 818 78 COLOUR_TEXT_REGION 75 818 78 818 51 STRAND 111 818 120 COLOUR_TEXT_REGION 111 818 120 818 51 STRAND 124 818 135 COLOUR_TEXT_REGION 124 818 135 818 51 STRAND 139 818 143 COLOUR_TEXT_REGION 139 818 143 818 51 STRAND 159 818 168 COLOUR_TEXT_REGION 159 818 168 818 51 STRAND 175 818 180 COLOUR_TEXT_REGION 175 818 180 818 51 STRAND 201 818 209 COLOUR_TEXT_REGION 201 818 209 818 51 STRAND 215 818 221 COLOUR_TEXT_REGION 215 818 221 818 51 STRAND 229 818 233 COLOUR_TEXT_REGION 229 818 233 818 51 STRAND 251 818 256 COLOUR_TEXT_REGION 251 818 256 818 51 STRAND 276 818 280 COLOUR_TEXT_REGION 276 818 280 818 51 STRAND 286 818 291 COLOUR_TEXT_REGION 286 818 291 818 51 STRAND 317 818 321 COLOUR_TEXT_REGION 317 818 321 818 51 HELIX 3 818 19 COLOUR_TEXT_REGION 3 818 19 818 50 HELIX 24 818 41 COLOUR_TEXT_REGION 24 818 41 818 50 HELIX 86 818 110 COLOUR_TEXT_REGION 86 818 110 818 50 HELIX 183 818 192 COLOUR_TEXT_REGION 183 818 192 818 50 HELIX 239 818 246 COLOUR_TEXT_REGION 239 818 246 818 50 HELIX 261 818 268 COLOUR_TEXT_REGION 261 818 268 818 50 HELIX 298 818 300 COLOUR_TEXT_REGION 298 818 300 818 50 HELIX 306 818 313 COLOUR_TEXT_REGION 306 818 313 818 50 STRAND 49 819 53 COLOUR_TEXT_REGION 49 819 53 819 51 STRAND 59 819 65 COLOUR_TEXT_REGION 59 819 65 819 51 STRAND 111 819 119 COLOUR_TEXT_REGION 111 819 119 819 51 STRAND 125 819 133 COLOUR_TEXT_REGION 125 819 133 819 51 STRAND 140 819 143 COLOUR_TEXT_REGION 140 819 143 819 51 STRAND 159 819 169 COLOUR_TEXT_REGION 159 819 169 819 51 STRAND 174 819 179 COLOUR_TEXT_REGION 174 819 179 819 51 STRAND 201 819 208 COLOUR_TEXT_REGION 201 819 208 819 51 STRAND 214 819 221 COLOUR_TEXT_REGION 214 819 221 819 51 STRAND 251 819 256 COLOUR_TEXT_REGION 251 819 256 819 51 STRAND 274 819 279 COLOUR_TEXT_REGION 274 819 279 819 51 STRAND 286 819 291 COLOUR_TEXT_REGION 286 819 291 819 51 STRAND 297 819 300 COLOUR_TEXT_REGION 297 819 300 819 51 STRAND 317 819 319 COLOUR_TEXT_REGION 317 819 319 819 51 HELIX 4 819 4 COLOUR_TEXT_REGION 4 819 4 819 50 HELIX 6 819 19 COLOUR_TEXT_REGION 6 819 19 819 50 HELIX 24 819 42 COLOUR_TEXT_REGION 24 819 42 819 50 HELIX 86 819 108 COLOUR_TEXT_REGION 86 819 108 819 50 HELIX 183 819 198 COLOUR_TEXT_REGION 183 819 198 819 50 HELIX 228 819 247 COLOUR_TEXT_REGION 228 819 247 819 50 HELIX 261 819 268 COLOUR_TEXT_REGION 261 819 268 819 50 HELIX 305 819 314 COLOUR_TEXT_REGION 305 819 314 819 50