QUERY                  : MVDPVGFAEAWKAQFPDSEPPRMELRSVGDIEQELERAKASIRRLEQEVNQERFRMIYLQTLLAKEK : QUERY 
UniRef90_H2RJ05        : ----VGFMEAWKAQFPDSEPPKMELHSVGDIELELEKCKGSIRRLEQEVNKERFRMIYLQTLLAKER : UniRef90_H2RJ05
UniRef90_F6URY3        : MWEPADFERHWRAEFPGEPVPAMQLDSVPAMQEELERCKLNLKRLQQVLAEEKFKVIYLQTALAREK : UniRef90_F6URY3
UniRef90_UPI0003AE9F0B : MWDPQDFERHWQAEFPGEDVPVMRLESVLDMERELERSRLNLKWLQQVLAEEKFKVVYLQAALEKR- : UniRef90_UPI0003AE9F0B
UniRef90_UPI0002B8E06F : MTMKEEFLAEWAKKFPGEEPPNVAFKNVEDIETSLTNCQTLIKDLEEKLSREKFHLIYLQTCLAAKR : UniRef90_UPI0002B8E06F
UniRef90_G3PJG5        : MVEQVGFVAAWKAQFPESNPPCMELNSLGNIEQELDKCKSSIRHLEKEVNKERFRMIYLQTLLAKER : UniRef90_G3PJG5
UniRef90_H9G722        : MVDPVGFAEAWRAQFSDAEPPTMALRSVSEIESELERCKASIRRLEVEVNKERFRMIYLQTLLARER : UniRef90_H9G722
UniRef90_G5BVQ6        : MWDPEEFERHWQAEFPGEQAPVMRLESVLDMERELERCKLNLKRLQQVLAEEKFKVSYLETALAGEK : UniRef90_G5BVQ6
UniRef90_Q61223        : MVDSVGFAEAWRAQFPDSEPPRMELRSVGDIEQELERCKASLRRLE--------------------- : UniRef90_Q61223
UniRef90_W5M7D1        : MWDPEEFERHWKNEFPEGQVPKMELGSVEDIERELETCKAHLRALQQQLSEEKFKVIYLQATIARQR : UniRef90_W5M7D1
UniRef90_UPI00022AFB63 : MWEQEEFEKHWRKEFPDGEVPQMDLNSVEDIESELETCKANLKRLQKALAEEKFKVIYLETTVARQK : UniRef90_UPI00022AFB63
UniRef90_B3DLU2        : ----AGFAEAWRAQFPDAEPPRMELRTVRDMEQELERCRASVRRLERELNRERFRMIYLQTLLAKER : UniRef90_B3DLU2
UniRef90_UPI000440B22C : MWEQEEFEKHWRNEFPDGEVPNMKLSSVEDIEKELERCKANLKTLQQALSEEKFKVIYLQTTIAQKK : UniRef90_UPI000440B22C
UniRef90_H0VW81        : ----------------------------GDIEQELERCKA-IRRLEQEVNQERFRMIYLQTLLAKEK : UniRef90_H0VW81

                       : 1---------11--------21--------31--------41--------51--------61----- :
OrigSeq                : MVDPVGFAEAWKAQFPDSEPPRMELRSVGDIEQELERAKASIRRLEQEVNQERFRMIYLQTLLAKEK : OrigSeq

Jnet                   : ---HHHHHHHHHH--------EEEE---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--- : Jnet
jhmm                   : ----HHHHHHHHH--------EEEE--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-- : jhmm
jpssm                  : ---HHHHHHHHHH--------EEEE---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--- : jpssm

Lupas 14               : ----------------------------------CCCCCCCCCCCCCC------------------- : Lupas 14
Lupas 21               : ---------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCC------------ : Lupas 21
Lupas 28               : ---------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----- : Lupas 28

Jnet_25                : ------B---B---B----BB-B-B--B--B---B--B---B--B---B----BBBBBB-BBB---- : Jnet_25
Jnet_5                 : ----------B-------------B------------B------B--------B-B-BB-------- : Jnet_5
Jnet_0                 : ----------------------------------------------------------B-------- : Jnet_0
Jnet Rel               : 9950999999874057887750441260258999999999999999999999889999999874299 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.