SILENT_MODE BLOCK_FILE jp_emsfoHv.concise.blc MAX_NSEQ 837 MAX_INPUT_LEN 839 OUTPUT_FILE jp_emsfoHv.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 281 826 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 827 281 836 H SPACE SUB_CHARS 1 827 281 836 E SPACE SUB_CHARS 1 827 281 836 - SPACE STRAND 14 830 19 COLOUR_TEXT_REGION 14 830 19 830 51 STRAND 23 830 27 COLOUR_TEXT_REGION 23 830 27 830 51 STRAND 33 830 37 COLOUR_TEXT_REGION 33 830 37 830 51 STRAND 44 830 48 COLOUR_TEXT_REGION 44 830 48 830 51 STRAND 54 830 60 COLOUR_TEXT_REGION 54 830 60 830 51 STRAND 69 830 74 COLOUR_TEXT_REGION 69 830 74 830 51 STRAND 80 830 85 COLOUR_TEXT_REGION 80 830 85 830 51 STRAND 101 830 101 COLOUR_TEXT_REGION 101 830 101 830 51 STRAND 108 830 113 COLOUR_TEXT_REGION 108 830 113 830 51 STRAND 122 830 127 COLOUR_TEXT_REGION 122 830 127 830 51 STRAND 134 830 137 COLOUR_TEXT_REGION 134 830 137 830 51 STRAND 153 830 156 COLOUR_TEXT_REGION 153 830 156 830 51 STRAND 164 830 165 COLOUR_TEXT_REGION 164 830 165 830 51 STRAND 173 830 178 COLOUR_TEXT_REGION 173 830 178 830 51 STRAND 184 830 187 COLOUR_TEXT_REGION 184 830 187 830 51 STRAND 195 830 199 COLOUR_TEXT_REGION 195 830 199 830 51 STRAND 204 830 208 COLOUR_TEXT_REGION 204 830 208 830 51 STRAND 214 830 220 COLOUR_TEXT_REGION 214 830 220 830 51 STRAND 226 830 229 COLOUR_TEXT_REGION 226 830 229 830 51 STRAND 246 830 251 COLOUR_TEXT_REGION 246 830 251 830 51 STRAND 254 830 259 COLOUR_TEXT_REGION 254 830 259 830 51 STRAND 265 830 268 COLOUR_TEXT_REGION 265 830 268 830 51 STRAND 14 835 19 COLOUR_TEXT_REGION 14 835 19 835 51 STRAND 23 835 27 COLOUR_TEXT_REGION 23 835 27 835 51 STRAND 33 835 37 COLOUR_TEXT_REGION 33 835 37 835 51 STRAND 44 835 48 COLOUR_TEXT_REGION 44 835 48 835 51 STRAND 54 835 60 COLOUR_TEXT_REGION 54 835 60 835 51 STRAND 69 835 74 COLOUR_TEXT_REGION 69 835 74 835 51 STRAND 80 835 85 COLOUR_TEXT_REGION 80 835 85 835 51 STRAND 100 835 102 COLOUR_TEXT_REGION 100 835 102 835 51 STRAND 108 835 113 COLOUR_TEXT_REGION 108 835 113 835 51 STRAND 122 835 126 COLOUR_TEXT_REGION 122 835 126 835 51 STRAND 134 835 136 COLOUR_TEXT_REGION 134 835 136 835 51 STRAND 153 835 156 COLOUR_TEXT_REGION 153 835 156 835 51 STRAND 163 835 166 COLOUR_TEXT_REGION 163 835 166 835 51 STRAND 173 835 177 COLOUR_TEXT_REGION 173 835 177 835 51 STRAND 184 835 187 COLOUR_TEXT_REGION 184 835 187 835 51 STRAND 195 835 199 COLOUR_TEXT_REGION 195 835 199 835 51 STRAND 204 835 208 COLOUR_TEXT_REGION 204 835 208 835 51 STRAND 214 835 220 COLOUR_TEXT_REGION 214 835 220 835 51 STRAND 226 835 229 COLOUR_TEXT_REGION 226 835 229 835 51 STRAND 239 835 240 COLOUR_TEXT_REGION 239 835 240 835 51 STRAND 246 835 251 COLOUR_TEXT_REGION 246 835 251 835 51 STRAND 254 835 259 COLOUR_TEXT_REGION 254 835 259 835 51 STRAND 265 835 267 COLOUR_TEXT_REGION 265 835 267 835 51 STRAND 14 836 19 COLOUR_TEXT_REGION 14 836 19 836 51 STRAND 23 836 27 COLOUR_TEXT_REGION 23 836 27 836 51 STRAND 33 836 37 COLOUR_TEXT_REGION 33 836 37 836 51 STRAND 46 836 49 COLOUR_TEXT_REGION 46 836 49 836 51 STRAND 54 836 60 COLOUR_TEXT_REGION 54 836 60 836 51 STRAND 69 836 74 COLOUR_TEXT_REGION 69 836 74 836 51 STRAND 81 836 86 COLOUR_TEXT_REGION 81 836 86 836 51 STRAND 108 836 112 COLOUR_TEXT_REGION 108 836 112 836 51 STRAND 122 836 127 COLOUR_TEXT_REGION 122 836 127 836 51 STRAND 134 836 138 COLOUR_TEXT_REGION 134 836 138 836 51 STRAND 152 836 156 COLOUR_TEXT_REGION 152 836 156 836 51 STRAND 174 836 178 COLOUR_TEXT_REGION 174 836 178 836 51 STRAND 184 836 187 COLOUR_TEXT_REGION 184 836 187 836 51 STRAND 196 836 199 COLOUR_TEXT_REGION 196 836 199 836 51 STRAND 204 836 207 COLOUR_TEXT_REGION 204 836 207 836 51 STRAND 213 836 220 COLOUR_TEXT_REGION 213 836 220 836 51 STRAND 226 836 230 COLOUR_TEXT_REGION 226 836 230 836 51 STRAND 246 836 251 COLOUR_TEXT_REGION 246 836 251 836 51 STRAND 254 836 259 COLOUR_TEXT_REGION 254 836 259 836 51 STRAND 264 836 269 COLOUR_TEXT_REGION 264 836 269 836 51