SILENT_MODE BLOCK_FILE jp_UjJcuZ8.concise.blc MAX_NSEQ 227 MAX_INPUT_LEN 229 OUTPUT_FILE jp_UjJcuZ8.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 387 216 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 217 387 226 H SPACE SUB_CHARS 1 217 387 226 E SPACE SUB_CHARS 1 217 387 226 - SPACE STRAND 10 220 13 COLOUR_TEXT_REGION 10 220 13 220 51 STRAND 25 220 28 COLOUR_TEXT_REGION 25 220 28 220 51 STRAND 32 220 38 COLOUR_TEXT_REGION 32 220 38 220 51 STRAND 53 220 58 COLOUR_TEXT_REGION 53 220 58 220 51 STRAND 64 220 67 COLOUR_TEXT_REGION 64 220 67 220 51 STRAND 80 220 84 COLOUR_TEXT_REGION 80 220 84 220 51 STRAND 88 220 93 COLOUR_TEXT_REGION 88 220 93 220 51 STRAND 99 220 103 COLOUR_TEXT_REGION 99 220 103 220 51 STRAND 109 220 112 COLOUR_TEXT_REGION 109 220 112 220 51 STRAND 124 220 128 COLOUR_TEXT_REGION 124 220 128 220 51 STRAND 132 220 139 COLOUR_TEXT_REGION 132 220 139 220 51 STRAND 150 220 152 COLOUR_TEXT_REGION 150 220 152 220 51 STRAND 159 220 161 COLOUR_TEXT_REGION 159 220 161 220 51 STRAND 179 220 179 COLOUR_TEXT_REGION 179 220 179 220 51 STRAND 185 220 189 COLOUR_TEXT_REGION 185 220 189 220 51 STRAND 195 220 195 COLOUR_TEXT_REGION 195 220 195 220 51 STRAND 294 220 296 COLOUR_TEXT_REGION 294 220 296 220 51 STRAND 302 220 307 COLOUR_TEXT_REGION 302 220 307 220 51 STRAND 321 220 327 COLOUR_TEXT_REGION 321 220 327 220 51 STRAND 333 220 335 COLOUR_TEXT_REGION 333 220 335 220 51 STRAND 347 220 352 COLOUR_TEXT_REGION 347 220 352 220 51 STRAND 356 220 361 COLOUR_TEXT_REGION 356 220 361 220 51 STRAND 374 220 378 COLOUR_TEXT_REGION 374 220 378 220 51 STRAND 11 225 13 COLOUR_TEXT_REGION 11 225 13 225 51 STRAND 25 225 28 COLOUR_TEXT_REGION 25 225 28 225 51 STRAND 32 225 38 COLOUR_TEXT_REGION 32 225 38 225 51 STRAND 54 225 58 COLOUR_TEXT_REGION 54 225 58 225 51 STRAND 64 225 66 COLOUR_TEXT_REGION 64 225 66 225 51 STRAND 80 225 84 COLOUR_TEXT_REGION 80 225 84 225 51 STRAND 88 225 93 COLOUR_TEXT_REGION 88 225 93 225 51 STRAND 99 225 103 COLOUR_TEXT_REGION 99 225 103 225 51 STRAND 110 225 111 COLOUR_TEXT_REGION 110 225 111 225 51 STRAND 124 225 128 COLOUR_TEXT_REGION 124 225 128 225 51 STRAND 132 225 139 COLOUR_TEXT_REGION 132 225 139 225 51 STRAND 149 225 152 COLOUR_TEXT_REGION 149 225 152 225 51 STRAND 159 225 161 COLOUR_TEXT_REGION 159 225 161 225 51 STRAND 178 225 180 COLOUR_TEXT_REGION 178 225 180 225 51 STRAND 185 225 189 COLOUR_TEXT_REGION 185 225 189 225 51 STRAND 269 225 271 COLOUR_TEXT_REGION 269 225 271 225 51 STRAND 294 225 297 COLOUR_TEXT_REGION 294 225 297 225 51 STRAND 302 225 307 COLOUR_TEXT_REGION 302 225 307 225 51 STRAND 323 225 327 COLOUR_TEXT_REGION 323 225 327 225 51 STRAND 333 225 335 COLOUR_TEXT_REGION 333 225 335 225 51 STRAND 347 225 351 COLOUR_TEXT_REGION 347 225 351 225 51 STRAND 356 225 361 COLOUR_TEXT_REGION 356 225 361 225 51 STRAND 374 225 378 COLOUR_TEXT_REGION 374 225 378 225 51 STRAND 10 226 13 COLOUR_TEXT_REGION 10 226 13 226 51 STRAND 25 226 27 COLOUR_TEXT_REGION 25 226 27 226 51 STRAND 32 226 37 COLOUR_TEXT_REGION 32 226 37 226 51 STRAND 51 226 58 COLOUR_TEXT_REGION 51 226 58 226 51 STRAND 63 226 67 COLOUR_TEXT_REGION 63 226 67 226 51 STRAND 80 226 83 COLOUR_TEXT_REGION 80 226 83 226 51 STRAND 88 226 93 COLOUR_TEXT_REGION 88 226 93 226 51 STRAND 100 226 102 COLOUR_TEXT_REGION 100 226 102 226 51 STRAND 109 226 112 COLOUR_TEXT_REGION 109 226 112 226 51 STRAND 124 226 128 COLOUR_TEXT_REGION 124 226 128 226 51 STRAND 132 226 138 COLOUR_TEXT_REGION 132 226 138 226 51 STRAND 159 226 162 COLOUR_TEXT_REGION 159 226 162 226 51 STRAND 185 226 189 COLOUR_TEXT_REGION 185 226 189 226 51 STRAND 194 226 197 COLOUR_TEXT_REGION 194 226 197 226 51 STRAND 205 226 205 COLOUR_TEXT_REGION 205 226 205 226 51 STRAND 302 226 306 COLOUR_TEXT_REGION 302 226 306 226 51 STRAND 320 226 326 COLOUR_TEXT_REGION 320 226 326 226 51 STRAND 333 226 335 COLOUR_TEXT_REGION 333 226 335 226 51 STRAND 347 226 352 COLOUR_TEXT_REGION 347 226 352 226 51 STRAND 356 226 361 COLOUR_TEXT_REGION 356 226 361 226 51 STRAND 374 226 378 COLOUR_TEXT_REGION 374 226 378 226 51