SILENT_MODE BLOCK_FILE jp_oZ7aqvl.concise.blc MAX_NSEQ 963 MAX_INPUT_LEN 965 OUTPUT_FILE jp_oZ7aqvl.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 124 952 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 953 124 962 H SPACE SUB_CHARS 1 953 124 962 E SPACE SUB_CHARS 1 953 124 962 - SPACE STRAND 21 956 27 COLOUR_TEXT_REGION 21 956 27 956 51 STRAND 43 956 49 COLOUR_TEXT_REGION 43 956 49 956 51 STRAND 53 956 57 COLOUR_TEXT_REGION 53 956 57 956 51 STRAND 63 956 68 COLOUR_TEXT_REGION 63 956 68 956 51 STRAND 73 956 76 COLOUR_TEXT_REGION 73 956 76 956 51 STRAND 89 956 95 COLOUR_TEXT_REGION 89 956 95 956 51 STRAND 99 956 103 COLOUR_TEXT_REGION 99 956 103 956 51 STRAND 107 956 111 COLOUR_TEXT_REGION 107 956 111 956 51 HELIX 5 956 17 COLOUR_TEXT_REGION 5 956 17 956 50 HELIX 33 956 39 COLOUR_TEXT_REGION 33 956 39 956 50 STRAND 21 961 27 COLOUR_TEXT_REGION 21 961 27 961 51 STRAND 43 961 57 COLOUR_TEXT_REGION 43 961 57 961 51 STRAND 63 961 68 COLOUR_TEXT_REGION 63 961 68 961 51 STRAND 73 961 76 COLOUR_TEXT_REGION 73 961 76 961 51 STRAND 89 961 95 COLOUR_TEXT_REGION 89 961 95 961 51 STRAND 99 961 103 COLOUR_TEXT_REGION 99 961 103 961 51 STRAND 107 961 111 COLOUR_TEXT_REGION 107 961 111 961 51 HELIX 5 961 17 COLOUR_TEXT_REGION 5 961 17 961 50 HELIX 32 961 40 COLOUR_TEXT_REGION 32 961 40 961 50 STRAND 21 962 27 COLOUR_TEXT_REGION 21 962 27 962 51 STRAND 42 962 48 COLOUR_TEXT_REGION 42 962 48 962 51 STRAND 53 962 58 COLOUR_TEXT_REGION 53 962 58 962 51 STRAND 63 962 67 COLOUR_TEXT_REGION 63 962 67 962 51 STRAND 73 962 76 COLOUR_TEXT_REGION 73 962 76 962 51 STRAND 88 962 95 COLOUR_TEXT_REGION 88 962 95 962 51 STRAND 99 962 103 COLOUR_TEXT_REGION 99 962 103 962 51 STRAND 107 962 111 COLOUR_TEXT_REGION 107 962 111 962 51 HELIX 6 962 17 COLOUR_TEXT_REGION 6 962 17 962 50 HELIX 35 962 37 COLOUR_TEXT_REGION 35 962 37 962 50