QUERY           : EKSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENK : QUERY 
UniRef90_M3ZT25 : EQSMANLHSKIVARKEQLALAKTELKLAKKEMKTKPDSKLQSMVDRKAAAVKRCEDQLLKMELQATDREENK : UniRef90_M3ZT25
UniRef90_G3PKT3 : EQSMANLQAKIDDQKKYLALLKTELKQAKKKAKGSSDPKLQTQVVDKKAAVRRCKEKLLKLDVQAINREENK : UniRef90_G3PKT3
UniRef90_H2RRT6 : DQSMATLQSKIDARKEQLALAKSGLKQAKKEAKAKGSSKLQTLVERKKAAVKRC-EQLLKMEIQATDREENK : UniRef90_H2RRT6
UniRef90_Q4SKE8 : DQSMANLQSKIEARKEQLVLAKSELKQAKAKAKGSADAKLQALVVRKKMAVKRCEEQLLKLEVQATDREENK : UniRef90_Q4SKE8
UniRef90_E7FE49 : -------------------------------AKALHDEKSKKAVETKKKAVQRISEQLMKLEVQATDREENK : UniRef90_E7FE49
UniRef90_G7N083 : --------------------------------KAQGDGKSRSVLEKKRRLLEKLQEQLAWLSVQATDKEENK : UniRef90_G7N083
UniRef90_G3N9U3 : --------------------------------KTSHDDKSRKAWKVKRKAVQRIEEQLMKLQVQATDREENK : UniRef90_G3N9U3
UniRef90_H2MM27 : ---------------------------------GNSDIKLQALVERKKAAVKRCEEHLLKMEVQATDREENK : UniRef90_H2MM27

                : 1---------11--------21--------31--------41--------51--------61--------71 :
OrigSeq         : EKSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENK : OrigSeq

Jnet            : -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH------- : Jnet
jhmm            : -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHEEEE------- : jhmm
jpssm           : --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHH------- : jpssm

Lupas 14        : ---ccccccccccccccCCCCCCCCCCCCCC------------cccccccCCCCCCCCCCCCCC-------- : Lupas 14
Lupas 21        : ---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCC- : Lupas 21
Lupas 28        : ---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCC- : Lupas 28

Jnet_25         : ---B--B---B------B--B---B--B---B-------B--BB--B--BB--B---BB-B-B-B------- : Jnet_25
Jnet_5          : --------------------------------------------------B--B---B-------------- : Jnet_5
Jnet_0          : ------------------------------------------------------------------------ : Jnet_0
Jnet Rel        : 805633899999999999999999999998731578763789999999999998888866621104502589 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.