SILENT_MODE BLOCK_FILE jp_DBG18gF.concise.blc MAX_NSEQ 992 MAX_INPUT_LEN 994 OUTPUT_FILE jp_DBG18gF.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 333 981 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 982 333 991 H SPACE SUB_CHARS 1 982 333 991 E SPACE SUB_CHARS 1 982 333 991 - SPACE STRAND 22 985 25 COLOUR_TEXT_REGION 22 985 25 985 51 STRAND 30 985 35 COLOUR_TEXT_REGION 30 985 35 985 51 STRAND 40 985 43 COLOUR_TEXT_REGION 40 985 43 985 51 STRAND 47 985 49 COLOUR_TEXT_REGION 47 985 49 985 51 STRAND 58 985 62 COLOUR_TEXT_REGION 58 985 62 985 51 STRAND 65 985 70 COLOUR_TEXT_REGION 65 985 70 985 51 STRAND 74 985 75 COLOUR_TEXT_REGION 74 985 75 985 51 STRAND 98 985 101 COLOUR_TEXT_REGION 98 985 101 985 51 STRAND 105 985 114 COLOUR_TEXT_REGION 105 985 114 985 51 STRAND 120 985 123 COLOUR_TEXT_REGION 120 985 123 985 51 STRAND 129 985 138 COLOUR_TEXT_REGION 129 985 138 985 51 STRAND 160 985 167 COLOUR_TEXT_REGION 160 985 167 985 51 STRAND 173 985 176 COLOUR_TEXT_REGION 173 985 176 985 51 STRAND 181 985 188 COLOUR_TEXT_REGION 181 985 188 985 51 STRAND 196 985 199 COLOUR_TEXT_REGION 196 985 199 985 51 STRAND 206 985 217 COLOUR_TEXT_REGION 206 985 217 985 51 STRAND 222 985 228 COLOUR_TEXT_REGION 222 985 228 985 51 STRAND 236 985 248 COLOUR_TEXT_REGION 236 985 248 985 51 STRAND 253 985 257 COLOUR_TEXT_REGION 253 985 257 985 51 STRAND 272 985 285 COLOUR_TEXT_REGION 272 985 285 985 51 STRAND 292 985 296 COLOUR_TEXT_REGION 292 985 296 985 51 STRAND 305 985 313 COLOUR_TEXT_REGION 305 985 313 985 51 STRAND 320 985 324 COLOUR_TEXT_REGION 320 985 324 985 51 STRAND 327 985 331 COLOUR_TEXT_REGION 327 985 331 985 51 HELIX 4 985 15 COLOUR_TEXT_REGION 4 985 15 985 50 STRAND 22 990 25 COLOUR_TEXT_REGION 22 990 25 990 51 STRAND 30 990 35 COLOUR_TEXT_REGION 30 990 35 990 51 STRAND 40 990 43 COLOUR_TEXT_REGION 40 990 43 990 51 STRAND 47 990 48 COLOUR_TEXT_REGION 47 990 48 990 51 STRAND 58 990 62 COLOUR_TEXT_REGION 58 990 62 990 51 STRAND 65 990 70 COLOUR_TEXT_REGION 65 990 70 990 51 STRAND 74 990 75 COLOUR_TEXT_REGION 74 990 75 990 51 STRAND 97 990 101 COLOUR_TEXT_REGION 97 990 101 990 51 STRAND 105 990 113 COLOUR_TEXT_REGION 105 990 113 990 51 STRAND 119 990 124 COLOUR_TEXT_REGION 119 990 124 990 51 STRAND 129 990 140 COLOUR_TEXT_REGION 129 990 140 990 51 STRAND 160 990 168 COLOUR_TEXT_REGION 160 990 168 990 51 STRAND 173 990 176 COLOUR_TEXT_REGION 173 990 176 990 51 STRAND 182 990 189 COLOUR_TEXT_REGION 182 990 189 990 51 STRAND 195 990 199 COLOUR_TEXT_REGION 195 990 199 990 51 STRAND 206 990 217 COLOUR_TEXT_REGION 206 990 217 990 51 STRAND 222 990 228 COLOUR_TEXT_REGION 222 990 228 990 51 STRAND 235 990 248 COLOUR_TEXT_REGION 235 990 248 990 51 STRAND 253 990 257 COLOUR_TEXT_REGION 253 990 257 990 51 STRAND 272 990 285 COLOUR_TEXT_REGION 272 990 285 990 51 STRAND 292 990 295 COLOUR_TEXT_REGION 292 990 295 990 51 STRAND 305 990 313 COLOUR_TEXT_REGION 305 990 313 990 51 STRAND 320 990 324 COLOUR_TEXT_REGION 320 990 324 990 51 STRAND 328 990 332 COLOUR_TEXT_REGION 328 990 332 990 51 HELIX 4 990 15 COLOUR_TEXT_REGION 4 990 15 990 50 STRAND 22 991 26 COLOUR_TEXT_REGION 22 991 26 991 51 STRAND 30 991 34 COLOUR_TEXT_REGION 30 991 34 991 51 STRAND 40 991 43 COLOUR_TEXT_REGION 40 991 43 991 51 STRAND 46 991 49 COLOUR_TEXT_REGION 46 991 49 991 51 STRAND 57 991 62 COLOUR_TEXT_REGION 57 991 62 991 51 STRAND 65 991 70 COLOUR_TEXT_REGION 65 991 70 991 51 STRAND 74 991 76 COLOUR_TEXT_REGION 74 991 76 991 51 STRAND 101 991 101 COLOUR_TEXT_REGION 101 991 101 991 51 STRAND 105 991 114 COLOUR_TEXT_REGION 105 991 114 991 51 STRAND 129 991 138 COLOUR_TEXT_REGION 129 991 138 991 51 STRAND 159 991 163 COLOUR_TEXT_REGION 159 991 163 991 51 STRAND 180 991 188 COLOUR_TEXT_REGION 180 991 188 991 51 STRAND 207 991 216 COLOUR_TEXT_REGION 207 991 216 991 51 STRAND 221 991 227 COLOUR_TEXT_REGION 221 991 227 991 51 STRAND 239 991 247 COLOUR_TEXT_REGION 239 991 247 991 51 STRAND 253 991 258 COLOUR_TEXT_REGION 253 991 258 991 51 STRAND 271 991 285 COLOUR_TEXT_REGION 271 991 285 991 51 STRAND 292 991 296 COLOUR_TEXT_REGION 292 991 296 991 51 STRAND 304 991 313 COLOUR_TEXT_REGION 304 991 313 991 51 STRAND 320 991 324 COLOUR_TEXT_REGION 320 991 324 991 51 STRAND 327 991 329 COLOUR_TEXT_REGION 327 991 329 991 51 HELIX 3 991 15 COLOUR_TEXT_REGION 3 991 15 991 50 HELIX 100 991 100 COLOUR_TEXT_REGION 100 991 100 991 50