SILENT_MODE BLOCK_FILE jp_GUa9hFB.concise.blc MAX_NSEQ 282 MAX_INPUT_LEN 284 OUTPUT_FILE jp_GUa9hFB.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 138 271 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 272 138 281 H SPACE SUB_CHARS 1 272 138 281 E SPACE SUB_CHARS 1 272 138 281 - SPACE STRAND 129 275 133 COLOUR_TEXT_REGION 129 275 133 275 51 HELIX 27 275 35 COLOUR_TEXT_REGION 27 275 35 275 50 HELIX 39 275 48 COLOUR_TEXT_REGION 39 275 48 275 50 HELIX 57 275 73 COLOUR_TEXT_REGION 57 275 73 275 50 HELIX 79 275 85 COLOUR_TEXT_REGION 79 275 85 275 50 HELIX 91 275 102 COLOUR_TEXT_REGION 91 275 102 275 50 HELIX 112 275 123 COLOUR_TEXT_REGION 112 275 123 275 50 STRAND 129 280 133 COLOUR_TEXT_REGION 129 280 133 280 51 HELIX 27 280 35 COLOUR_TEXT_REGION 27 280 35 280 50 HELIX 39 280 48 COLOUR_TEXT_REGION 39 280 48 280 50 HELIX 57 280 73 COLOUR_TEXT_REGION 57 280 73 280 50 HELIX 79 280 84 COLOUR_TEXT_REGION 79 280 84 280 50 HELIX 91 280 102 COLOUR_TEXT_REGION 91 280 102 280 50 HELIX 112 280 123 COLOUR_TEXT_REGION 112 280 123 280 50 STRAND 5 281 5 COLOUR_TEXT_REGION 5 281 5 281 51 STRAND 129 281 134 COLOUR_TEXT_REGION 129 281 134 281 51 HELIX 27 281 35 COLOUR_TEXT_REGION 27 281 35 281 50 HELIX 39 281 48 COLOUR_TEXT_REGION 39 281 48 281 50 HELIX 57 281 73 COLOUR_TEXT_REGION 57 281 73 281 50 HELIX 79 281 85 COLOUR_TEXT_REGION 79 281 85 281 50 HELIX 91 281 101 COLOUR_TEXT_REGION 91 281 101 281 50 HELIX 110 281 124 COLOUR_TEXT_REGION 110 281 124 281 50