QUERY               : MEITSDMEEDKDLMLKLLDKNGFVLKKVEIYRSNYLAILEKRTNGIRNFEINNNGNMRIFGYKMMEHHIQKFTDIGMSCKIAKNGNVYLDIKRSAENIEAVITVASEL : QUERY 
UniRef90_E5DI00     : --ITDQMEADKNLMMEILATNLFTIKKLDVYRSNFIAVLEKRTFGIRSFEVSNKGNFRISGYKMTEEQVKHFEDLGMVAKHSKNGNVYLDIPRTQENIENIIHAVDTL : UniRef90_E5DI00
UniRef90_I7LHB8     : --VTDTMQAFAETIKLGLEELDFDVKGIDENRSNLEVKINKCSHGIRQVEVRRADMIRIFGYNMSEEFAKKFTDVGFTSKIG-GKNIYLDIATTSENIQTLISVLK-- : UniRef90_I7LHB8
UniRef90_E5EZ21     : -EISPELESLAEQAKEIV-ESKFEVKEMVTYCSNFHIKLKKRTLGIRQFELTNSNKFRVFGYNMDDSIAKKLESLGAVVKKG-GSNIYLDFDLSKEIIETVINSL--- : UniRef90_E5EZ21
UniRef90_E5E4L7     : -EIHECMEAFKDFALEYL-TDKIEVKNTVVDRSNFLILFAKRISSVGALEIKNKGEVRVVGRKPSDKVVEKLASIGMKYRQ-TPAQTYFDIECTEDNIVNIIDALIE- : UniRef90_E5E4L7
UniRef90_I3WVY4     : -KINDEMLEMVSRTFAMLENNIDTKPDYTEDRSNLFVHFTKRLKGIASIEIRNADLLRISIRKPEEGQVEYFKTIGMVVHKVTPTVTYMDLPRTMENLEILVNAV--- : UniRef90_I3WVY4
UniRef90_J7I561     : -EITVEMTKNIELVERLLSNLGIEHKQAVINRQNYEITLNKRADGYRKFEILNRGIFRIVGYKVSEEIINNFKTLGCEIKQG-PANCYIDITANENNIVRLM------ : UniRef90_J7I561
UniRef90_A0A023W6X3 : --VTADMKATAESIKKRVEELDVETKDIETYRSNLWVTLTKRAKGVRKFEVLNKGMFRIFGYKVRTELLDILKECEATVKEATSGNCYIDMPLTEDVINFVLNIDKEI : UniRef90_A0A023W6X3
UniRef90_D9I6I5     : --VNSAQEEFKDYTLERVSK-FFEVKDVIIDRSNYLVRLKKRTKGVRQFECMHKGDFRIFAYQVPENMHRALIKAGMTFKRGASNNAYYDIKCTNEN----------- : UniRef90_D9I6I5
UniRef90_E3SF76     : --VTDEMEATAEYIKEQLLSIGIDFKSISEDRSNLIVKF-KRVKTLKQIDVRRDGQIRVHAYNTEQKIVKQFTDVGFSVKVG-GLNTYIDNVMSTENIQHVINILK-- : UniRef90_E3SF76
UniRef90_E5EQ31     : -EITEDMISIKDFAVEYI-EGKVELKGTHEDRSNFLILFKKGIKGLGCIEIKNKPEIRVCIRKASKEAIELFSSIGMKYRE-TPAQTYFDMPKSHDNVKLLID----- : UniRef90_E5EQ31
UniRef90_G3MUJ6     : --VTPEMVTLADEVKALL-EDRIEIREIAENRSNLEVRFAKRTNGIRQIEVRRDGMMRIFGYNMTDKEKQVFTSLNLDVKIKTGGNTYIDFQNVSSEVIKTVTNA--- : UniRef90_G3MUJ6
UniRef90_Q7Y4P8     : --VTPEMHELANFVFENI-KDKVEVKEIGENRSNLEVRFAKRVLGIRQIEIRRDGALRIFAYNMSETESKLFTSLENDVKIKIGGKTYIDFPNVSKEIITLVTNV--- : UniRef90_Q7Y4P8
UniRef90_Q56EC9     : -EITAEMTGLMEKISALVEEN-IGLKAVEIYRQNYQIIFSKRTEGYRKFEVLNNGKFRIFGYKVAEDKLEAFRQVGAEIKVG-GSNTYIDIEQNEVNIAKVMQIA--- : UniRef90_Q56EC9

                    : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101----- :
OrigSeq             : MEITSDMEEDKDLMLKLLDKNGFVLKKVEIYRSNYLAILEKRTNGIRNFEINNNGNMRIFGYKMMEHHIQKFTDIGMSCKIAKNGNVYLDIKRSAENIEAVITVASEL : OrigSeq

Jnet                : ----HHHHHHHHHHHHHHH-----EEEEEEE--EHHHHHHHH----EEEEEE----EEEEE----HHHHHHHHH--EEEEEE----EEEE----HHHHHHHHHHHH-- : Jnet
jhmm                : ----HHHHHHHHHHHHHHH-----EEEEEEE-EEEEHHHHH-----EEEEEE----EEEEE----HHHHHHHHH--EEEEEE----EEEE----HHHHHHHHHHHH-- : jhmm
jpssm               : ---HHHHHHHHHHHHHHH---------EEEE--HHHHHHHHH----EEEEEE----EEEEE----HHHHHHHHH-EEEEEEE----EEEEE---HHHHHHHHHHHH-- : jpssm

Lupas 14            : ------------------------------------------------------------------------------------------------------------ : Lupas 14
Lupas 21            : ------------------------------------------------------------------------------------------------------------ : Lupas 21
Lupas 28            : ------------------------------------------------------------------------------------------------------------ : Lupas 28

Jnet_25             : --B---B--BB-BBB-BB----B-B--B---BBBBBBBB--B--BB-BB-B-----BBBBBB-B---BB-BB--B-B-B-------BBBBB--B--BB--BB-BB--- : Jnet_25
Jnet_5              : ------B------B---B----------------B-B-B------B--B-B-----B-B-B----------B--B-B-B-------B-B-B------B--BB------ : Jnet_5
Jnet_0              : -------------B----------------------B-----------------------B-------------------------B-------------B------- : Jnet_0
Jnet Rel            : 997289999999999985178862013466310102566772065327887168855888506756788777631267897168855886115168888999886189 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.