SILENT_MODE BLOCK_FILE jp_LCKANse.concise.blc MAX_NSEQ 994 MAX_INPUT_LEN 996 OUTPUT_FILE jp_LCKANse.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 224 983 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 984 224 993 H SPACE SUB_CHARS 1 984 224 993 E SPACE SUB_CHARS 1 984 224 993 - SPACE STRAND 12 987 16 COLOUR_TEXT_REGION 12 987 16 987 51 STRAND 22 987 25 COLOUR_TEXT_REGION 22 987 25 987 51 STRAND 31 987 36 COLOUR_TEXT_REGION 31 987 36 987 51 STRAND 46 987 49 COLOUR_TEXT_REGION 46 987 49 987 51 STRAND 56 987 58 COLOUR_TEXT_REGION 56 987 58 987 51 STRAND 65 987 68 COLOUR_TEXT_REGION 65 987 68 987 51 STRAND 75 987 76 COLOUR_TEXT_REGION 75 987 76 987 51 STRAND 84 987 87 COLOUR_TEXT_REGION 84 987 87 987 51 STRAND 93 987 95 COLOUR_TEXT_REGION 93 987 95 987 51 STRAND 102 987 104 COLOUR_TEXT_REGION 102 987 104 987 51 STRAND 111 987 113 COLOUR_TEXT_REGION 111 987 113 987 51 STRAND 119 987 122 COLOUR_TEXT_REGION 119 987 122 987 51 STRAND 129 987 133 COLOUR_TEXT_REGION 129 987 133 987 51 STRAND 139 987 139 COLOUR_TEXT_REGION 139 987 139 987 51 STRAND 146 987 148 COLOUR_TEXT_REGION 146 987 148 987 51 STRAND 155 987 158 COLOUR_TEXT_REGION 155 987 158 987 51 STRAND 175 987 178 COLOUR_TEXT_REGION 175 987 178 987 51 STRAND 184 987 189 COLOUR_TEXT_REGION 184 987 189 987 51 STRAND 194 987 200 COLOUR_TEXT_REGION 194 987 200 987 51 STRAND 208 987 214 COLOUR_TEXT_REGION 208 987 214 987 51 STRAND 222 987 223 COLOUR_TEXT_REGION 222 987 223 987 51 STRAND 5 992 7 COLOUR_TEXT_REGION 5 992 7 992 51 STRAND 13 992 16 COLOUR_TEXT_REGION 13 992 16 992 51 STRAND 22 992 25 COLOUR_TEXT_REGION 22 992 25 992 51 STRAND 31 992 35 COLOUR_TEXT_REGION 31 992 35 992 51 STRAND 47 992 49 COLOUR_TEXT_REGION 47 992 49 992 51 STRAND 56 992 58 COLOUR_TEXT_REGION 56 992 58 992 51 STRAND 65 992 68 COLOUR_TEXT_REGION 65 992 68 992 51 STRAND 74 992 77 COLOUR_TEXT_REGION 74 992 77 992 51 STRAND 84 992 86 COLOUR_TEXT_REGION 84 992 86 992 51 STRAND 93 992 95 COLOUR_TEXT_REGION 93 992 95 992 51 STRAND 102 992 104 COLOUR_TEXT_REGION 102 992 104 992 51 STRAND 111 992 113 COLOUR_TEXT_REGION 111 992 113 992 51 STRAND 119 992 122 COLOUR_TEXT_REGION 119 992 122 992 51 STRAND 129 992 133 COLOUR_TEXT_REGION 129 992 133 992 51 STRAND 138 992 140 COLOUR_TEXT_REGION 138 992 140 992 51 STRAND 146 992 148 COLOUR_TEXT_REGION 146 992 148 992 51 STRAND 155 992 157 COLOUR_TEXT_REGION 155 992 157 992 51 STRAND 174 992 178 COLOUR_TEXT_REGION 174 992 178 992 51 STRAND 184 992 189 COLOUR_TEXT_REGION 184 992 189 992 51 STRAND 194 992 199 COLOUR_TEXT_REGION 194 992 199 992 51 STRAND 208 992 213 COLOUR_TEXT_REGION 208 992 213 992 51 STRAND 222 992 222 COLOUR_TEXT_REGION 222 992 222 992 51 STRAND 12 993 15 COLOUR_TEXT_REGION 12 993 15 993 51 STRAND 22 993 26 COLOUR_TEXT_REGION 22 993 26 993 51 STRAND 32 993 38 COLOUR_TEXT_REGION 32 993 38 993 51 STRAND 45 993 48 COLOUR_TEXT_REGION 45 993 48 993 51 STRAND 56 993 58 COLOUR_TEXT_REGION 56 993 58 993 51 STRAND 65 993 68 COLOUR_TEXT_REGION 65 993 68 993 51 STRAND 84 993 87 COLOUR_TEXT_REGION 84 993 87 993 51 STRAND 93 993 95 COLOUR_TEXT_REGION 93 993 95 993 51 STRAND 102 993 104 COLOUR_TEXT_REGION 102 993 104 993 51 STRAND 111 993 113 COLOUR_TEXT_REGION 111 993 113 993 51 STRAND 120 993 122 COLOUR_TEXT_REGION 120 993 122 993 51 STRAND 129 993 132 COLOUR_TEXT_REGION 129 993 132 993 51 STRAND 146 993 147 COLOUR_TEXT_REGION 146 993 147 993 51 STRAND 155 993 159 COLOUR_TEXT_REGION 155 993 159 993 51 STRAND 177 993 178 COLOUR_TEXT_REGION 177 993 178 993 51 STRAND 183 993 189 COLOUR_TEXT_REGION 183 993 189 993 51 STRAND 194 993 200 COLOUR_TEXT_REGION 194 993 200 993 51 STRAND 208 993 216 COLOUR_TEXT_REGION 208 993 216 993 51 STRAND 222 993 223 COLOUR_TEXT_REGION 222 993 223 993 51