SILENT_MODE BLOCK_FILE jp_eaZE1NB.concise.blc MAX_NSEQ 1176 MAX_INPUT_LEN 1178 OUTPUT_FILE jp_eaZE1NB.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 74 1165 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 1166 74 1175 H SPACE SUB_CHARS 1 1166 74 1175 E SPACE SUB_CHARS 1 1166 74 1175 - SPACE STRAND 4 1169 9 COLOUR_TEXT_REGION 4 1169 9 1169 51 STRAND 18 1169 20 COLOUR_TEXT_REGION 18 1169 20 1169 51 STRAND 31 1169 36 COLOUR_TEXT_REGION 31 1169 36 1169 51 STRAND 45 1169 52 COLOUR_TEXT_REGION 45 1169 52 1169 51 HELIX 22 1169 26 COLOUR_TEXT_REGION 22 1169 26 1169 50 HELIX 56 1169 69 COLOUR_TEXT_REGION 56 1169 69 1169 50 STRAND 4 1174 9 COLOUR_TEXT_REGION 4 1174 9 1174 51 STRAND 18 1174 19 COLOUR_TEXT_REGION 18 1174 19 1174 51 STRAND 32 1174 36 COLOUR_TEXT_REGION 32 1174 36 1174 51 STRAND 45 1174 52 COLOUR_TEXT_REGION 45 1174 52 1174 51 HELIX 20 1174 20 COLOUR_TEXT_REGION 20 1174 20 1174 50 HELIX 22 1174 26 COLOUR_TEXT_REGION 22 1174 26 1174 50 HELIX 56 1174 70 COLOUR_TEXT_REGION 56 1174 70 1174 50 STRAND 5 1175 9 COLOUR_TEXT_REGION 5 1175 9 1175 51 STRAND 17 1175 21 COLOUR_TEXT_REGION 17 1175 21 1175 51 STRAND 31 1175 35 COLOUR_TEXT_REGION 31 1175 35 1175 51 STRAND 44 1175 52 COLOUR_TEXT_REGION 44 1175 52 1175 51 HELIX 23 1175 25 COLOUR_TEXT_REGION 23 1175 25 1175 50 HELIX 56 1175 69 COLOUR_TEXT_REGION 56 1175 69 1175 50