SILENT_MODE BLOCK_FILE jp_k4dTTGx.concise.blc MAX_NSEQ 926 MAX_INPUT_LEN 928 OUTPUT_FILE jp_k4dTTGx.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 185 915 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 916 185 925 H SPACE SUB_CHARS 1 916 185 925 E SPACE SUB_CHARS 1 916 185 925 - SPACE STRAND 4 919 11 COLOUR_TEXT_REGION 4 919 11 919 51 STRAND 16 919 17 COLOUR_TEXT_REGION 16 919 17 919 51 STRAND 49 919 53 COLOUR_TEXT_REGION 49 919 53 919 51 STRAND 71 919 76 COLOUR_TEXT_REGION 71 919 76 919 51 STRAND 87 919 90 COLOUR_TEXT_REGION 87 919 90 919 51 STRAND 111 919 116 COLOUR_TEXT_REGION 111 919 116 919 51 STRAND 132 919 138 COLOUR_TEXT_REGION 132 919 138 919 51 STRAND 146 919 146 COLOUR_TEXT_REGION 146 919 146 919 51 STRAND 157 919 160 COLOUR_TEXT_REGION 157 919 160 919 51 STRAND 176 919 183 COLOUR_TEXT_REGION 176 919 183 919 51 HELIX 28 919 37 COLOUR_TEXT_REGION 28 919 37 919 50 HELIX 93 919 105 COLOUR_TEXT_REGION 93 919 105 919 50 HELIX 118 919 126 COLOUR_TEXT_REGION 118 919 126 919 50 STRAND 4 924 11 COLOUR_TEXT_REGION 4 924 11 924 51 STRAND 49 924 52 COLOUR_TEXT_REGION 49 924 52 924 51 STRAND 71 924 76 COLOUR_TEXT_REGION 71 924 76 924 51 STRAND 87 924 90 COLOUR_TEXT_REGION 87 924 90 924 51 STRAND 111 924 116 COLOUR_TEXT_REGION 111 924 116 924 51 STRAND 132 924 138 COLOUR_TEXT_REGION 132 924 138 924 51 STRAND 146 924 147 COLOUR_TEXT_REGION 146 924 147 924 51 STRAND 157 924 160 COLOUR_TEXT_REGION 157 924 160 924 51 STRAND 177 924 183 COLOUR_TEXT_REGION 177 924 183 924 51 HELIX 29 924 37 COLOUR_TEXT_REGION 29 924 37 924 50 HELIX 57 924 58 COLOUR_TEXT_REGION 57 924 58 924 50 HELIX 93 924 105 COLOUR_TEXT_REGION 93 924 105 924 50 HELIX 118 924 126 COLOUR_TEXT_REGION 118 924 126 924 50 STRAND 4 925 11 COLOUR_TEXT_REGION 4 925 11 925 51 STRAND 16 925 17 COLOUR_TEXT_REGION 16 925 17 925 51 STRAND 49 925 54 COLOUR_TEXT_REGION 49 925 54 925 51 STRAND 71 925 76 COLOUR_TEXT_REGION 71 925 76 925 51 STRAND 87 925 90 COLOUR_TEXT_REGION 87 925 90 925 51 STRAND 111 925 115 COLOUR_TEXT_REGION 111 925 115 925 51 STRAND 131 925 138 COLOUR_TEXT_REGION 131 925 138 925 51 STRAND 157 925 160 COLOUR_TEXT_REGION 157 925 160 925 51 STRAND 176 925 183 COLOUR_TEXT_REGION 176 925 183 925 51 HELIX 28 925 37 COLOUR_TEXT_REGION 28 925 37 925 50 HELIX 93 925 104 COLOUR_TEXT_REGION 93 925 104 925 50 HELIX 118 925 125 COLOUR_TEXT_REGION 118 925 125 925 50