SILENT_MODE BLOCK_FILE jp_NwwF274.concise.blc MAX_NSEQ 304 MAX_INPUT_LEN 306 OUTPUT_FILE jp_NwwF274.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 216 293 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 294 216 303 H SPACE SUB_CHARS 1 294 216 303 E SPACE SUB_CHARS 1 294 216 303 - SPACE STRAND 5 297 8 COLOUR_TEXT_REGION 5 297 8 297 51 STRAND 180 297 180 COLOUR_TEXT_REGION 180 297 180 297 51 STRAND 185 297 187 COLOUR_TEXT_REGION 185 297 187 297 51 HELIX 12 297 35 COLOUR_TEXT_REGION 12 297 35 297 50 HELIX 43 297 44 COLOUR_TEXT_REGION 43 297 44 297 50 HELIX 50 297 77 COLOUR_TEXT_REGION 50 297 77 297 50 HELIX 83 297 91 COLOUR_TEXT_REGION 83 297 91 297 50 HELIX 93 297 95 COLOUR_TEXT_REGION 93 297 95 297 50 HELIX 112 297 134 COLOUR_TEXT_REGION 112 297 134 297 50 HELIX 144 297 174 COLOUR_TEXT_REGION 144 297 174 297 50 HELIX 176 297 179 COLOUR_TEXT_REGION 176 297 179 297 50 HELIX 189 297 205 COLOUR_TEXT_REGION 189 297 205 297 50 STRAND 5 302 8 COLOUR_TEXT_REGION 5 302 8 302 51 STRAND 186 302 187 COLOUR_TEXT_REGION 186 302 187 302 51 HELIX 13 302 36 COLOUR_TEXT_REGION 13 302 36 302 50 HELIX 50 302 77 COLOUR_TEXT_REGION 50 302 77 302 50 HELIX 83 302 95 COLOUR_TEXT_REGION 83 302 95 302 50 HELIX 111 302 135 COLOUR_TEXT_REGION 111 302 135 302 50 HELIX 144 302 180 COLOUR_TEXT_REGION 144 302 180 302 50 HELIX 189 302 205 COLOUR_TEXT_REGION 189 302 205 302 50 STRAND 5 303 8 COLOUR_TEXT_REGION 5 303 8 303 51 STRAND 94 303 95 COLOUR_TEXT_REGION 94 303 95 303 51 STRAND 131 303 134 COLOUR_TEXT_REGION 131 303 134 303 51 STRAND 179 303 181 COLOUR_TEXT_REGION 179 303 181 303 51 STRAND 185 303 187 COLOUR_TEXT_REGION 185 303 187 303 51 HELIX 11 303 34 COLOUR_TEXT_REGION 11 303 34 303 50 HELIX 41 303 46 COLOUR_TEXT_REGION 41 303 46 303 50 HELIX 50 303 76 COLOUR_TEXT_REGION 50 303 76 303 50 HELIX 82 303 90 COLOUR_TEXT_REGION 82 303 90 303 50 HELIX 118 303 126 COLOUR_TEXT_REGION 118 303 126 303 50 HELIX 145 303 173 COLOUR_TEXT_REGION 145 303 173 303 50 HELIX 178 303 178 COLOUR_TEXT_REGION 178 303 178 303 50 HELIX 189 303 195 COLOUR_TEXT_REGION 189 303 195 303 50 HELIX 197 303 205 COLOUR_TEXT_REGION 197 303 205 303 50