SILENT_MODE BLOCK_FILE jp_5qXK_In.concise.blc MAX_NSEQ 802 MAX_INPUT_LEN 804 OUTPUT_FILE jp_5qXK_In.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 363 791 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 792 363 801 H SPACE SUB_CHARS 1 792 363 801 E SPACE SUB_CHARS 1 792 363 801 - SPACE STRAND 47 795 52 COLOUR_TEXT_REGION 47 795 52 795 51 STRAND 59 795 61 COLOUR_TEXT_REGION 59 795 61 795 51 STRAND 100 795 102 COLOUR_TEXT_REGION 100 795 102 795 51 STRAND 165 795 169 COLOUR_TEXT_REGION 165 795 169 795 51 STRAND 228 795 230 COLOUR_TEXT_REGION 228 795 230 795 51 STRAND 287 795 290 COLOUR_TEXT_REGION 287 795 290 795 51 HELIX 20 795 39 COLOUR_TEXT_REGION 20 795 39 795 50 HELIX 62 795 75 COLOUR_TEXT_REGION 62 795 75 795 50 HELIX 78 795 91 COLOUR_TEXT_REGION 78 795 91 795 50 HELIX 121 795 134 COLOUR_TEXT_REGION 121 795 134 795 50 HELIX 141 795 158 COLOUR_TEXT_REGION 141 795 158 795 50 HELIX 186 795 195 COLOUR_TEXT_REGION 186 795 195 795 50 HELIX 200 795 217 COLOUR_TEXT_REGION 200 795 217 795 50 HELIX 246 795 261 COLOUR_TEXT_REGION 246 795 261 795 50 HELIX 266 795 278 COLOUR_TEXT_REGION 266 795 278 795 50 HELIX 304 795 313 COLOUR_TEXT_REGION 304 795 313 795 50 HELIX 318 795 328 COLOUR_TEXT_REGION 318 795 328 795 50 HELIX 340 795 353 COLOUR_TEXT_REGION 340 795 353 795 50 STRAND 47 800 52 COLOUR_TEXT_REGION 47 800 52 800 51 STRAND 59 800 61 COLOUR_TEXT_REGION 59 800 61 800 51 STRAND 101 800 102 COLOUR_TEXT_REGION 101 800 102 800 51 STRAND 165 800 169 COLOUR_TEXT_REGION 165 800 169 800 51 STRAND 228 800 229 COLOUR_TEXT_REGION 228 800 229 800 51 STRAND 288 800 290 COLOUR_TEXT_REGION 288 800 290 800 51 HELIX 20 800 39 COLOUR_TEXT_REGION 20 800 39 800 50 HELIX 62 800 75 COLOUR_TEXT_REGION 62 800 75 800 50 HELIX 78 800 91 COLOUR_TEXT_REGION 78 800 91 800 50 HELIX 121 800 134 COLOUR_TEXT_REGION 121 800 134 800 50 HELIX 141 800 157 COLOUR_TEXT_REGION 141 800 157 800 50 HELIX 186 800 195 COLOUR_TEXT_REGION 186 800 195 800 50 HELIX 200 800 217 COLOUR_TEXT_REGION 200 800 217 800 50 HELIX 246 800 261 COLOUR_TEXT_REGION 246 800 261 800 50 HELIX 265 800 278 COLOUR_TEXT_REGION 265 800 278 800 50 HELIX 304 800 314 COLOUR_TEXT_REGION 304 800 314 800 50 HELIX 318 800 329 COLOUR_TEXT_REGION 318 800 329 800 50 HELIX 340 800 353 COLOUR_TEXT_REGION 340 800 353 800 50 STRAND 47 801 52 COLOUR_TEXT_REGION 47 801 52 801 51 STRAND 59 801 62 COLOUR_TEXT_REGION 59 801 62 801 51 STRAND 99 801 102 COLOUR_TEXT_REGION 99 801 102 801 51 STRAND 165 801 168 COLOUR_TEXT_REGION 165 801 168 801 51 STRAND 228 801 231 COLOUR_TEXT_REGION 228 801 231 801 51 STRAND 286 801 289 COLOUR_TEXT_REGION 286 801 289 801 51 HELIX 20 801 40 COLOUR_TEXT_REGION 20 801 40 801 50 HELIX 63 801 74 COLOUR_TEXT_REGION 63 801 74 801 50 HELIX 78 801 91 COLOUR_TEXT_REGION 78 801 91 801 50 HELIX 122 801 135 COLOUR_TEXT_REGION 122 801 135 801 50 HELIX 141 801 158 COLOUR_TEXT_REGION 141 801 158 801 50 HELIX 186 801 195 COLOUR_TEXT_REGION 186 801 195 801 50 HELIX 200 801 216 COLOUR_TEXT_REGION 200 801 216 801 50 HELIX 246 801 260 COLOUR_TEXT_REGION 246 801 260 801 50 HELIX 266 801 278 COLOUR_TEXT_REGION 266 801 278 801 50 HELIX 304 801 313 COLOUR_TEXT_REGION 304 801 313 801 50 HELIX 318 801 327 COLOUR_TEXT_REGION 318 801 327 801 50 HELIX 342 801 353 COLOUR_TEXT_REGION 342 801 353 801 50