SILENT_MODE
BLOCK_FILE jp_Iu9ZKzw.concise.blc
MAX_NSEQ 992
MAX_INPUT_LEN 994
OUTPUT_FILE jp_Iu9ZKzw.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 90 981   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 982 90 991 H SPACE
SUB_CHARS 1 982 90 991 E SPACE
SUB_CHARS 1 982 90 991 - SPACE
STRAND 6 985 10
COLOUR_TEXT_REGION 6 985 10 985 51
STRAND 22 985 26
COLOUR_TEXT_REGION 22 985 26 985 51
STRAND 33 985 38
COLOUR_TEXT_REGION 33 985 38 985 51
STRAND 50 985 54
COLOUR_TEXT_REGION 50 985 54 985 51
STRAND 59 985 67
COLOUR_TEXT_REGION 59 985 67 985 51
STRAND 74 985 83
COLOUR_TEXT_REGION 74 985 83 985 51
STRAND 5 990 10
COLOUR_TEXT_REGION 5 990 10 990 51
STRAND 22 990 26
COLOUR_TEXT_REGION 22 990 26 990 51
STRAND 33 990 38
COLOUR_TEXT_REGION 33 990 38 990 51
STRAND 49 990 54
COLOUR_TEXT_REGION 49 990 54 990 51
STRAND 60 990 67
COLOUR_TEXT_REGION 60 990 67 990 51
STRAND 74 990 83
COLOUR_TEXT_REGION 74 990 83 990 51
STRAND 7 991 10
COLOUR_TEXT_REGION 7 991 10 991 51
STRAND 22 991 26
COLOUR_TEXT_REGION 22 991 26 991 51
STRAND 33 991 38
COLOUR_TEXT_REGION 33 991 38 991 51
STRAND 50 991 54
COLOUR_TEXT_REGION 50 991 54 991 51
STRAND 59 991 67
COLOUR_TEXT_REGION 59 991 67 991 51
STRAND 74 991 83
COLOUR_TEXT_REGION 74 991 83 991 51