SILENT_MODE
BLOCK_FILE jp_13ODphf.concise.blc
MAX_NSEQ 50
MAX_INPUT_LEN 50
OUTPUT_FILE jp_13ODphf.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 88 20   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 21 88 30 H SPACE
SUB_CHARS 1 21 88 30 E SPACE
SUB_CHARS 1 21 88 30 - SPACE
STRAND 15 24 16
COLOUR_TEXT_REGION 15 24 16 24 51
STRAND 43 24 47
COLOUR_TEXT_REGION 43 24 47 24 51
STRAND 60 24 67
COLOUR_TEXT_REGION 60 24 67 24 51
STRAND 80 24 86
COLOUR_TEXT_REGION 80 24 86 24 51
STRAND 15 29 16
COLOUR_TEXT_REGION 15 29 16 29 51
STRAND 43 29 47
COLOUR_TEXT_REGION 43 29 47 29 51
STRAND 60 29 67
COLOUR_TEXT_REGION 60 29 67 29 51
STRAND 83 29 86
COLOUR_TEXT_REGION 83 29 86 29 51
STRAND 15 30 17
COLOUR_TEXT_REGION 15 30 17 30 51
STRAND 42 30 47
COLOUR_TEXT_REGION 42 30 47 30 51
STRAND 55 30 55
COLOUR_TEXT_REGION 55 30 55 30 51
STRAND 60 30 68
COLOUR_TEXT_REGION 60 30 68 30 51
STRAND 79 30 86
COLOUR_TEXT_REGION 79 30 86 30 51
HELIX 14 30 14
COLOUR_TEXT_REGION 14 30 14 30 50