QUERY                  : MEEFEFLRREVLGKELLKGSLRFTASPLEEERFGFPAFSGISRLTWLVSLFGELSLISATLEERKEDQYMKMTVQLETQNKGLLSWIEEKGPGLKRNRYVNFQFTSGSLEEVPSVGVN : QUERY 
UniRef90_F1NAF5        : -EEYKQLKKEVAGKDLVKGTLHFTGSVLDETKAGFPAFSGIARLTWLIDLFGDLTITSASREEQKDKNYSRMTVHFQTANKKPLTWIEERGPGMRREKKINFCFTSGCLENFPQA--- : UniRef90_F1NAF5
UniRef90_F7B4A8        : MEEFAFLKNEVAGKELMEGTLHFTGGPLDKGKFGFIAFSAISRLSWLVSLFGELSFISATMEERKEDQYQKMTVHLETVDKRPLTWIEERGPELKREHHVNFLFESGRLESLPP---- : UniRef90_F7B4A8
UniRef90_UPI00045716CB : --DYKQLKREVSGKELLKGTLHFTGSALDKQRTGFLAFSGIARISWLVDLFGELTVTSATLEEQQNERYSKLTAHFQTKTNRPLTWIEERGPDLKRGKNINFHFECGILEHIPDA--- : UniRef90_UPI00045716CB
UniRef90_G3QH85        : -------KKFYIAKKLLTAFFYNPTGPLEEERFGFPAFSGISRLTWLVSLFGELSLVSATLEERKEDQYMKMTVCLETEKKSPLSWIEEKGPGLKRNRYLSFHFKSGSLENVPNVGVN : UniRef90_G3QH85
UniRef90_W5MXM7        : --EYKQLKKDVTGKNLVEGTLHFTGGPLQP-GFGFIAFSGIARLTWLVDLFGELTVTSANVEEDKEKKYIKMTAHFQTKDKSPLTWIEERAPGLGRVKNISFRFDTGVMDCLPVA--- : UniRef90_W5MXM7
UniRef90_W5LJ87        : --DFKQLKKDIAGKQLEEGSLHFTGGPLKP-GFGFPAFSGISRLTWLVDLFGELSVKAATLEEDEDRKYSKMTAHFLTKDQKPLSWIEERGPGLGRTKRINLRFDSCTLTELPA---- : UniRef90_W5LJ87
UniRef90_H2TXU9        : -EDFKALKREVKGKVLQEGTLHFTGGPLKLN-FGFPAFSGIARLTWLVELFGNLSVTGATLEADPDKNYFKMTAKLKTSSDRTLTWIEERGPAFPRAKNINFQFDSCTLTRIPAA--- : UniRef90_H2TXU9
UniRef90_Q6GLB4        : -EQYKQLKKEVQGKKLVEGVLHFTGGHLDENLSGFPSFSGIARLSWLVDLFGDLIVTSATREEQKELNYSKLTAHFLTAENRPLTWVEERAPGMKRDKHIHFSFTTGILDTLPS---- : UniRef90_Q6GLB4
UniRef90_L5KU07        : MEEFTFLKKEVMGKDLLKGSLLFTVS---------------SRLTWLVSLFGELSLVSATLEERKEDQYMKMTVCLETENKRPLTWIEEKGPGLKRNRYLSFHFKSGSLENIPNVGIN : UniRef90_L5KU07
UniRef90_G1KTZ4        : -----------------KGTLHFTGGPLDEERSGFPAFSGIARLSWLVDLFGDLTVTSATREEQKEKNYSRMTAHFLTADKRPLTWIEERAPGMKRDKIINFCFKSGCLERLPDA--- : UniRef90_G1KTZ4
UniRef90_H2LHK8        : -EDFKELKRAVQGKILQEGTLHFTGGALKA-GFGFPAFSGIARLTWLVELFGKLSVSAATLEEEPAKGYSKLTAKLLTSDNRPLTWVEERQTGLPRAKNINFVFDSCTLSEIPAA--- : UniRef90_H2LHK8
UniRef90_M3ZFM1        : -EDYKQLKKEVEGKTLLEGSLHFAGGALKP-GFGFLAFSGIARLSWLADLFGELSVSAATFEEDAEQGYSKMTAQLLTSDSKPLTWIEERQAGLPRTKKINFVFDGFTLTQIPPA--- : UniRef90_M3ZFM1
UniRef90_Q08CI5        : --DFKQLKKDISGKTLEEGKLHFTGGPLKAN-FGFPSFSGIARLTWLVVLFGELTVTSVDLVEEKENKYMKMTAHLLTQQHKPLTWIEERGPGLGRAKHVEFRFQDVTITELPA---- : UniRef90_Q08CI5
UniRef90_E3TDF1        : --DFKQLKKDIAGKQLEEGSLHFTGGPLK-SGFGFLSFSGIARLTWLVDLFGELSVKEVSMVEEPERKHTKMTVCLLTEDQKPLTWTEERAEGLSRGKRIHLRFTTCTLTELPS---- : UniRef90_E3TDF1
UniRef90_F6T8F5        : ----KGLRKHESHKK-MPGHSRFIAGPLDEERFGFPSFSGISRLSWLVDLFGELSLVSATMEEQKDKKYLKMTADLKTADQRPLTWIEEKGPDLKREKHIKFSFTSGCLENLPAA--- : UniRef90_F6T8F5
UniRef90_UPI0003C119B3 : -----------AGKHVLVGTLSWVAWELAEERFGFPAFSGISRLTWLVSLFGELSLVSATLEERKEDQYVKMTVCLETENKSPLTWTEEKAPGLKR--RLSFHFRSGSLENMPNVGIN : UniRef90_UPI0003C119B3
UniRef90_UPI0003EBF3D5 : -----------------EGTLHFTGGALKP-GFGFPSFSGIARLTWLVELFGELSVSAATLEEDPANSYSKMTAKLRTSDSRSLTWIEERQPGLPRAKNINFQFDSGALTQIPPA--- : UniRef90_UPI0003EBF3D5
UniRef90_G5AV43        : MEEFAFLKKEVVGKELLKGSLLFTAGPLAAHRYTLPSAVG-SRGTQVHFDFQQWSSQEWCIHNEFHNSGHEITGGEEEQQRGPLSWIEEKGPGLKRNRYLSFHFKSGSLENVPNVGVN : UniRef90_G5AV43
UniRef90_V8NC54        : -EEYKQLKKEVSGKELVKGTLHFTGGPLDERYSGFPSFSGIARLTWLVDLFGDLTVTSATREQQKEKNYFRMTVHFQTANK------------------------------------- : UniRef90_V8NC54
UniRef90_UPI00020E507C : MEEFAFLKKEVVGKDLLKGSLLFTAGPLEEERFGFPAFSGISRLTWLVSLFGELSLVSATLEERKEDQYMKMTVCLETEKKR------------------------------------ : UniRef90_UPI00020E507C
UniRef90_W5P4X0        : -------------------------APLEEERFGFPAFSGISRLTWLVCLFGELSLVSATLE----DQYVKMTVRLETENKSPLTWTEEKTPGLKR--RLSFHFRSGSPENM------ : UniRef90_W5P4X0
UniRef90_UPI0004446EBB : -EDYKQLKKEVEGKTLLEGSLHFAGGALKP-GFGFPAFSGIARLSWLVDLFGELSVRAATFEEDAKQGYSKMTAQLLTSDSKL----------------------------------- : UniRef90_UPI0004446EBB
UniRef90_R7T7C7        : -DQFQALKNLVKTRGALKEASVFNGWIEDFSASGSPFHSGINLLQTHVDMFGDLTASSC--EIRRTENEITAKAVLHNTDKRLVTIDITRGPQMTRAKKFRYEFTDGS---------- : UniRef90_R7T7C7
UniRef90_UPI0002240B28 : -EEYISLKKEVSGKELVKGTLHFTAGPLDEERFGFPSFSGISRLSWLVDLFGELSLVSSTMEEQKTRN-------------------------------------------------- : UniRef90_UPI0002240B28
UniRef90_A7T143        : -------------------------WIGDLTRAGFPSFSGLSRIHIVYTLFGEVTVSKASL--LREENRICITATLLTKDKRPIEWTEDRGEGFQRSFGMDFELEDGSKFHYPP---- : UniRef90_A7T143
UniRef90_UPI00034F5AB7 : MEEFAFLKKEVVGKELLKGSLLFTAGPLAAHRYTLPSAVG-SRGTQVHFDFQQWSSQEWCIHNEFHNSGHEIT--------------------------------------------- : UniRef90_UPI00034F5AB7
UniRef90_K1R0U7        : ----------------LKGS--YNGWVEDHKTSGPPFVCNVSLIETACHLCGDVKAVGGTYSENL-DSFH-ATAHLEAPDKRTVTISLRRKESDGREKSIIFQLQDGTVLNL------ : UniRef90_K1R0U7

                       : 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111----- :
OrigSeq                : MEEFEFLRREVLGKELLKGSLRFTASPLEEERFGFPAFSGISRLTWLVSLFGELSLISATLEERKEDQYMKMTVQLETQNKGLLSWIEEKGPGLKRNRYVNFQFTSGSLEEVPSVGVN : OrigSeq

Jnet                   : -HHHHHHHHHHHHHHHHHHHHHH-------------HH--HHHHHHHHHHH---EE--EEHHHH-----EEEEEEE-------EEEEEE---------EEEEEE----E--------- : Jnet
jhmm                   : -HHHHHHHHHHH---HHHHHHHH-------------EE--HHHHHHHHHHH---EE--EEEEHH-----EEEEEEE-------EEEEEE---------EEEEEE---EE--------- : jhmm
jpssm                  : -HHHHHHHHHHHHHHHHHHHHH--------------HHHHH-H--HEE-----HHHHHHHHHHH-----EEEEEEEE------EEEEEE---------EEEEEE-------------- : jpssm

Lupas 14               : ---------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21               : ---------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28               : ---------------------------------------------------------------------------------------------------------------------- : Lupas 28

Jnet_25                : ---B--B---B-B--BB-BBBBBBBBB-----BBBBBBBBBBBB-BBB-BBB-BBB--B----------B-B-B-B------BB-BBB-----B-----B-B-B--BBB--BB----- : Jnet_25
Jnet_5                 : --------------------B---B-----------B-BB---B-----BB--B-----------------B-B---------B-B-------------B-B-B-------B------ : Jnet_5
Jnet_0                 : ---------------------------------------------------------------------------------------------------------------------- : Jnet_0
Jnet Rel               : 7389999999992119998741146777777777631110230441444304220110000231146825889887057888516775147777654258898547721356777889 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.