SILENT_MODE BLOCK_FILE jp_ot12nt_.concise.blc MAX_NSEQ 50 MAX_INPUT_LEN 50 OUTPUT_FILE jp_ot12nt_.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 164 16 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 17 164 26 H SPACE SUB_CHARS 1 17 164 26 E SPACE SUB_CHARS 1 17 164 26 - SPACE STRAND 3 20 17 COLOUR_TEXT_REGION 3 20 17 20 51 STRAND 66 20 72 COLOUR_TEXT_REGION 66 20 72 20 51 STRAND 74 20 79 COLOUR_TEXT_REGION 74 20 79 20 51 STRAND 93 20 100 COLOUR_TEXT_REGION 93 20 100 20 51 STRAND 105 20 116 COLOUR_TEXT_REGION 105 20 116 20 51 STRAND 147 20 151 COLOUR_TEXT_REGION 147 20 151 20 51 STRAND 157 20 161 COLOUR_TEXT_REGION 157 20 161 20 51 HELIX 24 20 39 COLOUR_TEXT_REGION 24 20 39 20 50 HELIX 46 20 59 COLOUR_TEXT_REGION 46 20 59 20 50 HELIX 135 20 145 COLOUR_TEXT_REGION 135 20 145 20 50 STRAND 3 25 17 COLOUR_TEXT_REGION 3 25 17 25 51 STRAND 66 25 70 COLOUR_TEXT_REGION 66 25 70 25 51 STRAND 75 25 79 COLOUR_TEXT_REGION 75 25 79 25 51 STRAND 93 25 100 COLOUR_TEXT_REGION 93 25 100 25 51 STRAND 105 25 117 COLOUR_TEXT_REGION 105 25 117 25 51 STRAND 147 25 151 COLOUR_TEXT_REGION 147 25 151 25 51 STRAND 157 25 161 COLOUR_TEXT_REGION 157 25 161 25 51 HELIX 24 25 38 COLOUR_TEXT_REGION 24 25 38 25 50 HELIX 46 25 59 COLOUR_TEXT_REGION 46 25 59 25 50 HELIX 135 25 145 COLOUR_TEXT_REGION 135 25 145 25 50 STRAND 3 26 17 COLOUR_TEXT_REGION 3 26 17 26 51 STRAND 68 26 68 COLOUR_TEXT_REGION 68 26 68 26 51 STRAND 71 26 78 COLOUR_TEXT_REGION 71 26 78 26 51 STRAND 94 26 100 COLOUR_TEXT_REGION 94 26 100 26 51 STRAND 105 26 115 COLOUR_TEXT_REGION 105 26 115 26 51 STRAND 148 26 151 COLOUR_TEXT_REGION 148 26 151 26 51 STRAND 157 26 161 COLOUR_TEXT_REGION 157 26 161 26 51 HELIX 24 26 41 COLOUR_TEXT_REGION 24 26 41 26 50 HELIX 46 26 58 COLOUR_TEXT_REGION 46 26 58 26 50 HELIX 135 26 145 COLOUR_TEXT_REGION 135 26 145 26 50 HELIX 147 26 147 COLOUR_TEXT_REGION 147 26 147 26 50