QUERY : SAYPITGKLGSELTMTDTVGQVVLGWKVSDLKSSTAVIPGYPVAGQVWEATATVNAIRGSVTPAVSQFNARTADGINYRVLWQAAGPDTISGATIPQGEQSTGKIYFDVTGPSPTIVAMNNGMEDLLIWEP : QUERY
UniRef90_L0IZ30 : --GPTVGKFGSQGTLVDAGGAVVQGWTVTNLRPSSDVIP-FPVQGRLWEASATDTAIRGTVTPIIPDMNSRAANGDNYRVIWNVALEKGVNPSTLAQGGSTTGKLYFDVTATDPNSVVYNDGVQDLLIWV- : UniRef90_L0IZ30
UniRef90_D5P8S3 : --YPVRQSFGTQEQLNDSDGAVITGWTVSNLHPSNDPIP-YQPHGKLWEATATVKAIKGTVTPLVADFNARAANGQNYPELGNVATAQGVNPASIPQGQQKTGKLYFDVVGPNPDNVVYNAGGRDLLVWT- : UniRef90_D5P8S3
UniRef90_Z5XFQ2 : --YPIVGRLGSPLTMTDSVGQVSLSWKVSDLKPSSDVMPGYPVEGRLWEATATVDAISGPVTPAISQFNAVAPNQAAYRVLWMVAAPSNISGATIPQGATATGKIHFDVTGPAPTTVTMNNGMEDLLIWTP : UniRef90_Z5XFQ2
UniRef90_UPI00036C0CCC : ----CPHRMGSHQRLTDGGGAVVQEWTITGLHKSADAAPGYPVAGQLWEATASVHAVSGTVTPVIPNLAAVSGSEEHYRALWQLASPAGLPGATLAEGQSSTGKVYFDVTGGAPAMVIYQDGAMPTLMW-- : UniRef90_UPI00036C0CCC
UniRef90_A1UCZ7 : ---PCPHKLGSAQRLVDAAGAVVQEWTVTDLRPSADPAPGYPLAGRLWEATATVNAVTGTVTPVIPNLRAVGAGKESYPVLWQIASPAGIPAATLAQGQSSSGKLYFDVTGTDPASVVYSAGSKPLMMW-- : UniRef90_A1UCZ7
UniRef90_D5P7J6 : ATYPVVGKLGSELTMTDSVGQVVLAWTVSNLQPSNDVTPGYTPTGKLWEATATVRSIRGTVTPAISQFNAIAPNAAAYRVLWYVASPTNISGATIPDGAQATGKIHFDVTGPAPTTVTMNNGMEDLLIWGP : UniRef90_D5P7J6
UniRef90_UPI0002F09C86 : -AEPAIQPFGTPEQLND--GAMATSYTVSNLGPANVVIPGYQPRGKLYQADVTARADRGTVTPVVADFNARAANSDTYRVINTVPTPGGINPGPIAQGAAANGKIYFDVTGPPPDGVVYNDGVEDVLIWT- : UniRef90_UPI0002F09C86
UniRef90_F5Z2Q1 : ------GKLGSTLQATDTVGQVVYSWRVSGLQPSSDTMPGYPVAGKVWESTATVNAIRGSVTPAISQFNAVAPDRAAYRVLWQVAAPKAISGATIPQGAQSTGKIYFDVTGPPPTTVTMNNGMEDLMVWGP : UniRef90_F5Z2Q1
UniRef90_I4BST0 : ----CAHRFGAHQQVADGGG--VQDWAVTDLKKSGDVAPGFPVAGQLWEATATVMAVSGTSTPVIPNFSA-TSDGGSYPVLWQVASPQGISAATLAQGQTSTGKIYFDVTGGDPMAVKYTAGGAEPLMW-- : UniRef90_I4BST0
UniRef90_A3Q538 : --ESCPHRFGSPQQLTDAGGAMVQQWSVSDLRASTDTAPGYPLAGRLWEATASVEALTGAVTPIIPNVYAVSASGERYQVLWQLASPSSIPGATISQGQTSTGKVYFDVTGADPMAVIYTNGGTPAMMW-- : UniRef90_A3Q538
UniRef90_L8F5N5 : ASAVTTSTLGSAAKLNN--GDVVQAWTVTDLKPSSDTIP-YEVRGKLWEVTATDEAVQGNVTPIVSNFNVRAADGTNYRALFQVATPQGVNPSTIPQGEKASGKIYFDVTGPEPTTVVYNAGGKDLLVW-- : UniRef90_L8F5N5
UniRef90_E6TPT0 : ----CMHRFGSQQQAEMGGG--VQEWSVTNLTKSADPAPGYPLAGQLWEATASVTATSGGSTPIIPNFNASTADGGSYRVLWQMASPQGISGAALAQGQTATGKIYFDVTGGDPVAVSYDAGGSEPLMW-- : UniRef90_E6TPT0
UniRef90_I0RRA6 : SSAVHSVTLGSQGKLVD--GNVIQGWTITDLKPSSDTIP-YPVYGTLWEATATDEAIQGSVTPIISNLNARAADGTNYRVLFGAATPQGVNPATLAEGQQTTGKIYFDVTGPDPDRVVYNAGGLDLLVWT- : UniRef90_I0RRA6
UniRef90_I0S004 : ---PTIQRFGTTEQLVD--GPLVTAYTVSNLQPSNVVIPGYPSAGKIWQADVTAVAQSGTVTPLVADFNARAGNGQNYRVIIPPPAPNGLSDAPLAQGQQASGKIYFDVTGAPPDSVVYNDGVEDVLIWT- : UniRef90_I0S004
UniRef90_A4T1X8 : ---PCGHQFGSPQQLTDAGGAVVQEWVISDLRESSVALPGYTARGQVWEASATVRAVTGTVTPIIPNLYTVTAAGQRYPVLWQIASPQGLPATTLGEGQASSGAIYFDAVGPQPMAVVYDNGTPTQLFW-- : UniRef90_A4T1X8
UniRef90_L8FIH3 : -------PLGSQARLEN--GDVVQAWTISDLKPSSDQIP-YAVQGTLWEATATDEAVSGSVIPIVSNLNARAANGENYRVLFQVATPQGVNPSTLAPGQKTTGKVYFDVTGEAPTTVVYNDGERDLLAW-- : UniRef90_L8FIH3
UniRef90_U5WV69 : -------SFGTAEQLVD--GPMVTSYTVANLQPSNVTIPGYTPHGKLYQAEVTAKSVSGVVTPVVSDFNARSASGQNYRVIDTVPVPNGLNPAPINQGDQRSGLIYFDVTGQPPNGVVYNDGVQDVLIWT- : UniRef90_U5WV69
UniRef90_A4TG03 : ----VIHHFGAGAELVN--GTVVQEWTVSDLKPSSDVIP-YPVVGTLWEATATDTAVEGSVIPIVSNFNARARSGQTYRVLFGVATPQGVNPSTLGQGESTTGTIYFDVTGDAPDSVVYNAGGPDLAVW-- : UniRef90_A4TG03
UniRef90_G7CJ26 : APDVTTAEIGEQAKLQN--GDVVQGWTITDLKPSSDEIP-YEVQGTLWEATATDEAIQGTVIPIVSNLNARSADGENYRVLFQVPTPQGVNPEALAEGEKTTGKVYFDVTGQPPESVVYNDGEKDLVVWV- : UniRef90_G7CJ26
UniRef90_Q73VR2 : ----NIQGFGVSEQLVD--GPLVTDYTVSNLQPSNVSIPGYTPKGTLYQADVSVRSDGGVVTPMVHDFIARGPNGQNYRVIDNVAVPNGLSPAPIPQGTESTGTLYFDVTGAPPNGVVYNDGMQDVLMWT- : UniRef90_Q73VR2
UniRef90_X8BNC5 : AAGSCPHRFGAAQQLPDAGGG-TQEWTITALKKSEAVLPGYSPAGQLWEASATVKAARGTITPLIPNLAAHA-TGAHYPVLWQVGTDQGLPGATLNEGQTSSGTLYFDVTGPDPMAVVYSNGTAPAMMW-- : UniRef90_X8BNC5
UniRef90_W9BJK9 : ----NIKPFG-QQEIIDSGGS-AIGYTVSGLRPSSDAIP-YPVAGQLYEATVTVDAVRGAVSPVVPFFNARAENGASYRVLANVFTPQGLSGGTVLPGESSTGKLYFDVVGDAPNSVVYNNGEHDLLGWV- : UniRef90_W9BJK9
UniRef90_A3PSI6 : -AGPAVHEIGQQADLVN--GSVVQGWTVTDLKASTDTIP-YAVRGTLWEATATDEAIQGAATPIVSNFNARARNGETYRALWQVATAQGVNPSTLGQGQETTGKLYFDVTGAQPDSVVYNDGGQDLLLWV- : UniRef90_A3PSI6
UniRef90_S7RFG6 : ---PTIQGFGTSERLVD--GPMVTSYTVGNLQLSDVTIPGYLPQGQLYSADVTARSVTGTITPLVSSFNARAANGDTYGVVNEVPAPGGLNPAPILQGNSQSGVLYFDVTGPPPNGVVYNDGVQDVLIWT- : UniRef90_S7RFG6
UniRef90_I6YKP2 : --------MGSHQRLSDADGAVVQEWTISGLRKSTDGVPGYPVAGQLWEATASVHAVTGSVTPLIPNLGAVSGSQERYPALWQVASPYGIPAATIAQGHTATGKVYFDVTGEAPAMVTYQGGGGSMLMW-- : UniRef90_I6YKP2
UniRef90_G7CMZ1 : ---PGVADFGATQHLHD--GGVTIAYTLEELEPSDDVVSNVALQGRLWEVSVTVEAVEGAATPVIPFFNARSADGQNYRALFTAVGEEALSGATLGQGQETEGNIYFDVTGAPPTEVVYNDAVQDRLIW-- : UniRef90_G7CMZ1
UniRef90_I4BPX6 : SADADVKYLGQPGEL--ANGSVVQHWTVTGLKPSTDTIP-YRPAGQLWEATATDEAISGNVTPIVSNLNARAKNGDTYRVLFGVATPQGVNPSTLAQGQKTTGKIYFDVTGEKPDSVFYSSGGPDELLWV- : UniRef90_I4BPX6
UniRef90_L0J938 : ADEPVIHSLGSPAHLVN--GDIVQAWTVRDLKPSTDTI-AYPVAGTLWEATATDTAVRGTVQPVVSNLNARARSGQTYRVLFGVATPQGVNPAPLAEGEQTTGKVYFDITGDTPDSVLYNAGGPDLAVWV- : UniRef90_L0J938
UniRef90_G8RRL6 : -----IKAFGVEQHINDASGGPLIGYTVTGLQPSTDTIP-YPVAGRLYEATLKVNAFGNWANPVIPRFNARAENGQGYQAITNVFIPQAIQGNAVPPNGSSSGKLYFDVVGVDPNSVVYNDGVRDILAWVP : UniRef90_G8RRL6
UniRef90_L8F3P1 : --------------MSDAGGAVVQEWTITDLQPSVDNAPGYPLAGRLWEASATVRAVSGTVTPVIPNFRATGKGQQSYPVLWQLASPAGISAATLQQGQSSSGKMYFDITGADPSAVIY------------ : UniRef90_L8F3P1
UniRef90_L0JAQ8 : ----TTTTFGNEARLVD--GAVTQGWTVTGLKPSSDAIP-YPVRGTLWEATATDTAISGGVTPIVSNFNARARNGDTYRVLFTVATPQGVNPSGLAQGQQTTGKLYFDVTGANPDSVVYNAAGTDLLLW-- : UniRef90_L0JAQ8
UniRef90_UPI00041C42DD : ----VTHPIGTQGTVPEGPG--VHGWTITDLRPSSDAIP-YQPRGALWEATATDEAIQGTVFPIVANLSARSASGQNYQALFTVPTAQGIAPAALTQGQKTSGKVYFDVTGDAPNTLVYQTGGADLIRWV- : UniRef90_UPI00041C42DD
UniRef90_A0A024JWD4 : ----NVQGFGATEQAVD--GPLITDYTVSNLRPSDVTIPGFQPAGQLYQADVTAKANTGTVEPQISRFAARAFNGTVYKVVNIGPVPNGLDPSPIEPGQQRSGELYFDVTGQKPIGVVYTDREDDFLVWT- : UniRef90_A0A024JWD4
UniRef90_W9AWF4 : --ETTTSQLGSQAKLTN--GDVVQGWTVTGLKVSTDTIP-YQPHGTLWEATATDEALQGSVTPIVSNLNARARNGDTYRALFGVATPQGVNPSTLQQGEKTTGKVYFDVTGEAPDSVVYANADQDLIVW-- : UniRef90_W9AWF4
UniRef90_A1UPD7 : ---PNLVTLGQPAELIN--GPVVQAWTISGLKPSSDVIPWH-VRGALWEATATNTAVAGTVQPIVSDLNARARNGDTYRTLFLVATPQGINPAALAQGQQTSGKIYFDVTGAQPDSVVYNDGARDLAVW-- : UniRef90_A1UPD7
UniRef90_X5LIB7 : -SGVTTAALGSQAKLDNNN--VVQGWTVTGLKPSTDTI-AYDVKGTLWEITATSEALEGSVTPIVSNFNIRSADGHNYRALFQVPTEQGVNPATIAQGEKTTGKVYFDVTGDKPTTVVYNSGGRDLLVW-- : UniRef90_X5LIB7
UniRef90_X7V6Q3 : -------TLGQQGRLTN--GDVVQAWTISDLKVSTDQLP-YQPKGTLWEATATDEAIQGSVIPIVANFNAKANDGETYRVLYGVASAQGVNPGTLSQGEKTTGKIYFDVTGANPETVTYTSGDEDLLTWK- : UniRef90_X7V6Q3
UniRef90_F5Z014 : ---PTTHPIGSQATIDN--GGVIQGWTISDLRPSSDAIP-YQPHGTLWEATATDVAIQGTVTPVVANLGARSPSGQTYPALFGVATPQGVNPSNLAQGQKTTGKVYFDVTGDAPNSAVYQFAGKDQLIWV- : UniRef90_F5Z014
UniRef90_G4I8G4 : AADVETTTFGDDAELVDNG--VVQAWVVSDLRRSADVI-DYPVHGTLWEATATGVAVAGTVTPVVSNFNARAADGATYRVLFGAATPLGVNPATLAESQHTTGKLYFDVTGPAPETVVYNSFGTDRAVW-- : UniRef90_G4I8G4
UniRef90_G8RT36 : ----NIKPFGNQVRMLDSNGFPMIGYTVRDLSPSSDPVP---HNGQLYEATMTVDAFGGVANPEIQRFNARAENRAMYRLL----TAAGI-GGPVQPGGSATGKLYFEVVGEAPNSVVYNDGTRDVIAWVP : UniRef90_G8RT36
UniRef90_W9BMC4 : -AVPASESYGNQQELNGPAG-TVTAWTVEDLRPSTDTLP-VPVNGTLYEATATVQAVQGTATPVVTDFNARSAVGTDYRAV-PAPTATGVNPTPLQQGTSDTGKIYFDVTGPAPESVVYSSGGQDVLVWK- : UniRef90_W9BMC4
UniRef90_A0R3W3 : ----TEAGFGEAQDLVAPTGDTA-SVTVTDIALSSDQIP-TEVEGQLYEATATIEAKEGTVTPVLSNFNARTADGQSYQAVYEVPASEG-NPEPLTEGASTTGKVYFDVKGEAPDSVVYSDVGSDEVIWT- : UniRef90_A0R3W3
UniRef90_UPI00038227DD : ----NIKPFGQQETLNE------IGYTVKGLKPSSDPVP---HNGRLYSATVTVEGVGGWANPIVGFFNARAESGANYRVIGG-----GVPSAP--PGGTTTGKLYFDVVGEAPNSVVYNDGFQDLMVWVP : UniRef90_UPI00038227DD
UniRef90_X5LR34 : SASPVGARFGNEQQFVDTDASVA-GYNVMDLKPSSVPLTGVPVTGQLWYAPIAVTAVRGSVIPEMQSFNARTPDGRNYRMLDQTLAPD-LGVSPMDEGQRTAGNIYFDVTGPPPTAVVYTDGAQDRLTW-- : UniRef90_X5LR34
UniRef90_UPI000373AFB4 : TSAPTTVAFGADGKLVD--GNTVAEWQISNLKPSTDVLSQH-LNGTLWEATAEYTAERGNSQPFVPNLNARTAAGENYRVLWGAATPQGINPAGLAEGQESKGKIYFDVTGAAPTSVVYTDGDREVIKW-- : UniRef90_UPI000373AFB4
UniRef90_UPI000367A00A : ---PTVVGFGETQEIQSPGGA--IEYTVKNLQPSG-------HNDGIWYSDVTAEAVNGSPTPNIADFNARAVNSSTYAVM-KGNEVDGLPNGPITQGSETSGRVYFDVNGTAPDSVVYRDAGHDKVVWK- : UniRef90_UPI000367A00A
UniRef90_I2AHM4 : ---PQVVAFGQSAEIPSANGAEAINYTVNNLQPSG-------HNDGIWYSDVTATGVRGNATPVIADFNARAVNSSTYAVM-KGHEVDGLPNQPIAPGAQATGRLYFDVRGTAPDSVVYDAAGVDKVVWK- : UniRef90_I2AHM4
UniRef90_B1MBL6 : ---PEDLDFGQKAEIPSPGGA--IDYTVSTLEPSG-------HNDGVWYSDVTARAVSGSPTPNIADFNARAVNSSTYAVM-KGDKPDGLPNQPLTAGSQTTGRIYFDVRGTAPDSVVYDAGGTDKVVWK- : UniRef90_B1MBL6
UniRef90_Q73Z85 : ---PQVLQFGQMAEISSNGG--TIDYTVSNLQPSG-------HNDGVWYSDVTAKGVSGNAVPNIADFNARAVNSSTFAVM-KGNQTDGLPEGPLPLGTPVTGRLYFDVRGTNPDSVVYDAGGTDKVVWK- : UniRef90_Q73Z85
UniRef90_Z5X4J7 : --------FGEQETLNGPNGLPYIGYAVGKLKPSSDPVP---HNGTLYSAKLTIDGFGGSYPPFIERFGARAESGEFYPSIW---------------GASNGGKLYFDVVGDVPNSVVFNDGTRDLLAWVP : UniRef90_Z5X4J7
UniRef90_L0IP89 : ----NIKPFGEPETLLDPTGFPTITYTVLGLTPSSDAVP---HNGQLYEATVNVEA-RGAM-PMVPMFNARAQSGANYRVI----------------GGTVPGKLYFDAVGDAPNSVVYNDGVQDLLTWIP : UniRef90_L0IP89
UniRef90_L0IRE6 : -AANNIKEYGVPESLNDVYGNPMITYTVQGLRPSSDAVP---HNGRLYEAMVTNDG----GIPIAALFNARAQSGANYRVIGG-----GIP-----------GKLYFDVVGDTPNSVVYNDGVQDLLVWV- : UniRef90_L0IRE6
UniRef90_X8DLD2 : ----------------------------STLEPSG-------HNDGVWYSDVTARAVSGSPTPNIADFNARAVNSSTYAVM-KGNKPDGLPNQPLTAGSQTTGRIYFDVRGTAPDSVVYDAGGTDRVVWK- : UniRef90_X8DLD2
UniRef90_X8AQJ5 : ---------------------------------------------------MTAVAQSGTVTPLVADFNARAGNGQNYRVIIPPPAPNGLSDAPLAQGQQASGKIYFDVTGAPPDSVVYNDGVEDVLIWT- : UniRef90_X8AQJ5
UniRef90_I2AH33 : ---------------------------------------------------------------MVADFNARAADGTTYRLVNTVPVPDGLSPDTLVQGDQSNGKLYFDVTGAPPNGVVYNDGVNDVLIWT- : UniRef90_I2AH33
UniRef90_I0PX46 : ----------------------------------------------MWEATVSVRAVKGAVAPVIPGIEAMGADHLGYPVPWQLASTSGISGATLAEGATATGKVYFAVTSAKPAIMDMALPMADCLC--- : UniRef90_I0PX46
UniRef90_G4I538 : ------VPFGTAVDIASDGG--TATYTVDNLAPVPADAQIVPAKGTIYAVDVTIVAKTGTIAYNGFWFVARASDGSNVAPAVGAVQP-GITSGQLQQGQQVAAHLAYDV---------------------- : UniRef90_G4I538
UniRef90_M0QPU2 : -------PVGATVDVSDSGNAARI--TIADLQ-QGQASEFADVKGELWQVTATIQGTKGTVNPLY--FSAATNDGTHLEASLGGAAEQ-IGTASIPSGQKTSGAVAFDV---------------------- : UniRef90_M0QPU2
: 1---------11--------21--------31--------41--------51--------61--------71--------81--------91--------101-------111-------121------- :
OrigSeq : SAYPITGKLGSELTMTDTVGQVVLGWKVSDLKSSTAVIPGYPVAGQVWEATATVNAIRGSVTPAVSQFNARTADGINYRVLWQAAGPDTISGATIPQGEQSTGKIYFDVTGPSPTIVAMNNGMEDLLIWEP : OrigSeq
Jnet : ------------EEEE-----EEEEEEE------------E----EEEEEEEEEEEE--EEEEE----EE--------EEE---------------------EEEEEEEE-----EEEE-----EEEEE-- : Jnet
jhmm : ------------EEEE-----EEEEEEE------------EE---EEEEEEEEEEEE--EEEEE----EE--------EEE--------------------EEEEEEEEE-----EEEE-----EEEEE-- : jhmm
jpssm : -------------EE------EEEEEEE-----------------EEEEEEEEEEEE---E-----------------EEE----------------------EEEEEEE------EEE-----EEEEE-- : jpssm
Lupas 14 : ----------------------------------------------------------------------------------------------------------------------------------- : Lupas 14
Lupas 21 : ----------------------------------------------------------------------------------------------------------------------------------- : Lupas 21
Lupas 28 : ----------------------------------------------------------------------------------------------------------------------------------- : Lupas 28
Jnet_25 : ----B---B---B-B----B-BBBBBBB--B--B-B-B--B---B-BB-B-B-B-B--B-B-BBB--BBBBB-----B-BBB-B-B---B----B-------B-BBBBB-B--BBBBBB-B----BBBB-- : Jnet_25
Jnet_5 : --------------B-------B--B-B---------B--------BB-B-B--------B-B-B--B-B-------B-BB---------------------B-B-B-B-------BB--------B-B-- : Jnet_5
Jnet_0 : ---------------------------------------------------B----------------------------------------------------B-----------B-------------- : Jnet_0
Jnet Rel : 99875225676424116787516888743664566545532077507899889998547104306664005677776423325677777777776667777324888886378872676278846888379 : Jnet Rel
Notes
Key:
Colour code for alignment:
Blue - Complete identity at a position
Shades of red - The more red a position is, the higher the level of
conservation of chemical properties of the amino acids
Jnet - Final secondary structure prediction for query
jalign - Jnet alignment prediction
jhmm - Jnet hmm profile prediction
jpssm - Jnet PSIBLAST pssm profile prediction
Lupas - Lupas Coil prediction (window size of 14, 21 and 28)
Note on coiled coil predictions - = less than 50% probability
c = between 50% and 90% probability
C = greater than 90% probability
Jnet_25 - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5 - Jnet prediction of burial, less than 5% exposure
Jnet_0 - Jnet prediction of burial, 0% exposure
Jnet Rel - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.