QUERY           : FDEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGN : QUERY 
UniRef90_Q49XI1 : FDEYITELKAEREVLSKDINKAVKDIEKRPENKKAYNKKENLEQQLIANQQKIDEATALQEKHGN : UniRef90_Q49XI1

                : 1---------11--------21--------31--------41--------51--------61--- :
OrigSeq         : FDEYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGN : OrigSeq

Jnet            : --HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHH----HHHHHHHHHH---- : Jnet
jhmm            : -HHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHH----HHHHHHHHH---- : jhmm
jpssm           : --HHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHH-----HHHHHHHHHHH--- : jpssm

Lupas 14        : ----CCCCCCCCCCCCCCccccccccccc--cccccccccccccc-------------------- : Lupas 14
Lupas 21        : ----CCCCCCCCCCCCCCCCCCCCC------ccccccccccccccccccccc------------- : Lupas 21
Lupas 28        : ----CCCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccccccccccccccccccccc------ : Lupas 28

Jnet_25         : ---BB--B-----BB---B--BB--B---------------B---B------B--B--B------ : Jnet_25
Jnet_5          : ----------------------------------------------------------------- : Jnet_5
Jnet_0          : ----------------------------------------------------------------- : Jnet_0
Jnet Rel        : 80799999874799999999999998702355532454312787643176127774888862799 : Jnet Rel

Notes
Key:
Colour code for alignment:
Blue            - Complete identity at a position
Shades of red   - The more red a position is, the higher the level of
                  conservation of chemical properties of the amino acids
Jnet            - Final secondary structure prediction for query
jalign          - Jnet alignment prediction
jhmm            - Jnet hmm profile prediction
jpssm           - Jnet PSIBLAST pssm profile prediction

Lupas           - Lupas Coil prediction (window size of 14, 21 and 28)

Note on coiled coil predictions  - = less than 50% probability
                                 c = between 50% and 90% probability
                                 C = greater than 90% probability

Jnet_25         - Jnet prediction of burial, less than 25% solvent accesibility
Jnet_5          - Jnet prediction of burial, less than 5% exposure
Jnet_0          - Jnet prediction of burial, 0% exposure
Jnet Rel        - Jnet reliability of prediction accuracy, ranges from 0 to 9, bigger is better.