SILENT_MODE BLOCK_FILE jp__A9AAp2.concise.blc MAX_NSEQ 663 MAX_INPUT_LEN 665 OUTPUT_FILE jp__A9AAp2.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 268 652 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 653 268 662 H SPACE SUB_CHARS 1 653 268 662 E SPACE SUB_CHARS 1 653 268 662 - SPACE STRAND 7 656 18 COLOUR_TEXT_REGION 7 656 18 656 51 STRAND 28 656 40 COLOUR_TEXT_REGION 28 656 40 656 51 STRAND 45 656 51 COLOUR_TEXT_REGION 45 656 51 656 51 STRAND 54 656 58 COLOUR_TEXT_REGION 54 656 58 656 51 STRAND 85 656 90 COLOUR_TEXT_REGION 85 656 90 656 51 STRAND 93 656 99 COLOUR_TEXT_REGION 93 656 99 656 51 STRAND 128 656 134 COLOUR_TEXT_REGION 128 656 134 656 51 STRAND 136 656 148 COLOUR_TEXT_REGION 136 656 148 656 51 STRAND 154 656 161 COLOUR_TEXT_REGION 154 656 161 656 51 STRAND 170 656 174 COLOUR_TEXT_REGION 170 656 174 656 51 STRAND 196 656 204 COLOUR_TEXT_REGION 196 656 204 656 51 STRAND 210 656 225 COLOUR_TEXT_REGION 210 656 225 656 51 STRAND 231 656 245 COLOUR_TEXT_REGION 231 656 245 656 51 STRAND 263 656 266 COLOUR_TEXT_REGION 263 656 266 656 51 HELIX 76 656 81 COLOUR_TEXT_REGION 76 656 81 656 50 HELIX 105 656 117 COLOUR_TEXT_REGION 105 656 117 656 50 STRAND 7 661 18 COLOUR_TEXT_REGION 7 661 18 661 51 STRAND 28 661 40 COLOUR_TEXT_REGION 28 661 40 661 51 STRAND 45 661 51 COLOUR_TEXT_REGION 45 661 51 661 51 STRAND 54 661 57 COLOUR_TEXT_REGION 54 661 57 661 51 STRAND 84 661 90 COLOUR_TEXT_REGION 84 661 90 661 51 STRAND 93 661 99 COLOUR_TEXT_REGION 93 661 99 661 51 STRAND 128 661 134 COLOUR_TEXT_REGION 128 661 134 661 51 STRAND 136 661 148 COLOUR_TEXT_REGION 136 661 148 661 51 STRAND 154 661 161 COLOUR_TEXT_REGION 154 661 161 661 51 STRAND 170 661 174 COLOUR_TEXT_REGION 170 661 174 661 51 STRAND 196 661 204 COLOUR_TEXT_REGION 196 661 204 661 51 STRAND 210 661 225 COLOUR_TEXT_REGION 210 661 225 661 51 STRAND 231 661 245 COLOUR_TEXT_REGION 231 661 245 661 51 STRAND 263 661 266 COLOUR_TEXT_REGION 263 661 266 661 51 HELIX 76 661 81 COLOUR_TEXT_REGION 76 661 81 661 50 HELIX 105 661 118 COLOUR_TEXT_REGION 105 661 118 661 50 STRAND 7 662 18 COLOUR_TEXT_REGION 7 662 18 662 51 STRAND 28 662 40 COLOUR_TEXT_REGION 28 662 40 662 51 STRAND 45 662 52 COLOUR_TEXT_REGION 45 662 52 662 51 STRAND 54 662 58 COLOUR_TEXT_REGION 54 662 58 662 51 STRAND 85 662 90 COLOUR_TEXT_REGION 85 662 90 662 51 STRAND 93 662 98 COLOUR_TEXT_REGION 93 662 98 662 51 STRAND 128 662 134 COLOUR_TEXT_REGION 128 662 134 662 51 STRAND 137 662 148 COLOUR_TEXT_REGION 137 662 148 662 51 STRAND 154 662 161 COLOUR_TEXT_REGION 154 662 161 662 51 STRAND 171 662 173 COLOUR_TEXT_REGION 171 662 173 662 51 STRAND 196 662 203 COLOUR_TEXT_REGION 196 662 203 662 51 STRAND 210 662 224 COLOUR_TEXT_REGION 210 662 224 662 51 STRAND 231 662 246 COLOUR_TEXT_REGION 231 662 246 662 51 STRAND 264 662 265 COLOUR_TEXT_REGION 264 662 265 662 51 HELIX 75 662 82 COLOUR_TEXT_REGION 75 662 82 662 50 HELIX 105 662 116 COLOUR_TEXT_REGION 105 662 116 662 50