SILENT_MODE BLOCK_FILE jp_dGJIq3i.concise.blc MAX_NSEQ 201 MAX_INPUT_LEN 203 OUTPUT_FILE jp_dGJIq3i.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 222 190 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 191 222 200 H SPACE SUB_CHARS 1 191 222 200 E SPACE SUB_CHARS 1 191 222 200 - SPACE STRAND 5 194 5 COLOUR_TEXT_REGION 5 194 5 194 51 STRAND 63 194 65 COLOUR_TEXT_REGION 63 194 65 194 51 STRAND 72 194 76 COLOUR_TEXT_REGION 72 194 76 194 51 HELIX 6 194 27 COLOUR_TEXT_REGION 6 194 27 194 50 HELIX 34 194 58 COLOUR_TEXT_REGION 34 194 58 194 50 HELIX 77 194 96 COLOUR_TEXT_REGION 77 194 96 194 50 HELIX 101 194 121 COLOUR_TEXT_REGION 101 194 121 194 50 HELIX 128 194 150 COLOUR_TEXT_REGION 128 194 150 194 50 HELIX 157 194 183 COLOUR_TEXT_REGION 157 194 183 194 50 HELIX 193 194 217 COLOUR_TEXT_REGION 193 194 217 194 50 STRAND 36 199 36 COLOUR_TEXT_REGION 36 199 36 199 51 STRAND 62 199 64 COLOUR_TEXT_REGION 62 199 64 199 51 STRAND 72 199 76 COLOUR_TEXT_REGION 72 199 76 199 51 HELIX 5 199 27 COLOUR_TEXT_REGION 5 199 27 199 50 HELIX 37 199 58 COLOUR_TEXT_REGION 37 199 58 199 50 HELIX 77 199 96 COLOUR_TEXT_REGION 77 199 96 199 50 HELIX 101 199 121 COLOUR_TEXT_REGION 101 199 121 199 50 HELIX 126 199 149 COLOUR_TEXT_REGION 126 199 149 199 50 HELIX 158 199 183 COLOUR_TEXT_REGION 158 199 183 199 50 HELIX 193 199 217 COLOUR_TEXT_REGION 193 199 217 199 50 STRAND 5 200 6 COLOUR_TEXT_REGION 5 200 6 200 51 STRAND 63 200 66 COLOUR_TEXT_REGION 63 200 66 200 51 STRAND 72 200 75 COLOUR_TEXT_REGION 72 200 75 200 51 STRAND 121 200 123 COLOUR_TEXT_REGION 121 200 123 200 51 STRAND 130 200 131 COLOUR_TEXT_REGION 130 200 131 200 51 HELIX 7 200 27 COLOUR_TEXT_REGION 7 200 27 200 50 HELIX 33 200 57 COLOUR_TEXT_REGION 33 200 57 200 50 HELIX 76 200 96 COLOUR_TEXT_REGION 76 200 96 200 50 HELIX 102 200 120 COLOUR_TEXT_REGION 102 200 120 200 50 HELIX 132 200 151 COLOUR_TEXT_REGION 132 200 151 200 50 HELIX 156 200 182 COLOUR_TEXT_REGION 156 200 182 200 50 HELIX 193 200 216 COLOUR_TEXT_REGION 193 200 216 200 50