SILENT_MODE BLOCK_FILE jp_GewyFtP.concise.blc MAX_NSEQ 590 MAX_INPUT_LEN 592 OUTPUT_FILE jp_GewyFtP.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 81 579 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 580 81 589 H SPACE SUB_CHARS 1 580 81 589 E SPACE SUB_CHARS 1 580 81 589 - SPACE STRAND 3 583 8 COLOUR_TEXT_REGION 3 583 8 583 51 STRAND 11 583 18 COLOUR_TEXT_REGION 11 583 18 583 51 STRAND 23 583 28 COLOUR_TEXT_REGION 23 583 28 583 51 STRAND 33 583 39 COLOUR_TEXT_REGION 33 583 39 583 51 STRAND 42 583 47 COLOUR_TEXT_REGION 42 583 47 583 51 STRAND 66 583 69 COLOUR_TEXT_REGION 66 583 69 583 51 STRAND 74 583 79 COLOUR_TEXT_REGION 74 583 79 583 51 STRAND 3 588 8 COLOUR_TEXT_REGION 3 588 8 588 51 STRAND 11 588 17 COLOUR_TEXT_REGION 11 588 17 588 51 STRAND 23 588 28 COLOUR_TEXT_REGION 23 588 28 588 51 STRAND 33 588 39 COLOUR_TEXT_REGION 33 588 39 588 51 STRAND 42 588 47 COLOUR_TEXT_REGION 42 588 47 588 51 STRAND 54 588 55 COLOUR_TEXT_REGION 54 588 55 588 51 STRAND 66 588 69 COLOUR_TEXT_REGION 66 588 69 588 51 STRAND 74 588 79 COLOUR_TEXT_REGION 74 588 79 588 51 STRAND 3 589 8 COLOUR_TEXT_REGION 3 589 8 589 51 STRAND 12 589 18 COLOUR_TEXT_REGION 12 589 18 589 51 STRAND 23 589 28 COLOUR_TEXT_REGION 23 589 28 589 51 STRAND 33 589 39 COLOUR_TEXT_REGION 33 589 39 589 51 STRAND 42 589 47 COLOUR_TEXT_REGION 42 589 47 589 51 STRAND 66 589 68 COLOUR_TEXT_REGION 66 589 68 589 51 STRAND 74 589 79 COLOUR_TEXT_REGION 74 589 79 589 51