SILENT_MODE BLOCK_FILE jp_zy_e8qq.concise.blc MAX_NSEQ 898 MAX_INPUT_LEN 900 OUTPUT_FILE jp_zy_e8qq.concise.ps PORTRAIT POINTSIZE 8 IDENT_WIDTH 12 X_OFFSET 2 Y_OFFSET 2 DEFINE_FONT 0 Helvetica DEFAULT DEFINE_FONT 1 Helvetica REL 0.75 DEFINE_FONT 7 Helvetica REL 0.6 DEFINE_FONT 3 Helvetica-Bold DEFAULT DEFINE_FONT 4 Times-Bold DEFAULT DEFINE_FONT 5 Helvetica-BoldOblique DEFAULT # DEFINE_COLOUR 3 1 0.62 0.67 # Turquiose DEFINE_COLOUR 4 1 1 0 # Yellow DEFINE_COLOUR 5 1 0 0 # Red DEFINE_COLOUR 7 1 0 1 # Purple DEFINE_COLOUR 8 0 0 1 # Blue DEFINE_COLOUR 9 0 1 0 # Green DEFINE_COLOUR 10 0.41 0.64 1.00 # Pale blue DEFINE_COLOUR 11 0.41 0.82 0.67 # Pale green DEFINE_COLOUR 50 0.69 0.18 0.37 # Pink (helix) DEFINE_COLOUR 51 1.00 0.89 0.00 # Gold (strand) NUMBER_INT 10 SETUP # # Highlight specific residues. # Avoid highlighting Lupas 'C' predictions by # limiting the highlighting to the alignments Scol_CHARS C 1 1 487 887 4 Ccol_CHARS H ALL 5 Ccol_CHARS P ALL 8 SURROUND_CHARS LIV ALL # # Replace known structure types with whitespace SUB_CHARS 1 888 487 897 H SPACE SUB_CHARS 1 888 487 897 E SPACE SUB_CHARS 1 888 487 897 - SPACE STRAND 44 891 50 COLOUR_TEXT_REGION 44 891 50 891 51 STRAND 78 891 80 COLOUR_TEXT_REGION 78 891 80 891 51 STRAND 119 891 123 COLOUR_TEXT_REGION 119 891 123 891 51 STRAND 186 891 187 COLOUR_TEXT_REGION 186 891 187 891 51 STRAND 196 891 199 COLOUR_TEXT_REGION 196 891 199 891 51 STRAND 268 891 272 COLOUR_TEXT_REGION 268 891 272 891 51 STRAND 303 891 304 COLOUR_TEXT_REGION 303 891 304 891 51 STRAND 440 891 443 COLOUR_TEXT_REGION 440 891 443 891 51 STRAND 452 891 457 COLOUR_TEXT_REGION 452 891 457 891 51 HELIX 8 891 17 COLOUR_TEXT_REGION 8 891 17 891 50 HELIX 23 891 37 COLOUR_TEXT_REGION 23 891 37 891 50 HELIX 53 891 66 COLOUR_TEXT_REGION 53 891 66 891 50 HELIX 107 891 115 COLOUR_TEXT_REGION 107 891 115 891 50 HELIX 164 891 171 COLOUR_TEXT_REGION 164 891 171 891 50 HELIX 227 891 237 COLOUR_TEXT_REGION 227 891 237 891 50 HELIX 260 891 260 COLOUR_TEXT_REGION 260 891 260 891 50 HELIX 285 891 298 COLOUR_TEXT_REGION 285 891 298 891 50 HELIX 312 891 335 COLOUR_TEXT_REGION 312 891 335 891 50 HELIX 347 891 357 COLOUR_TEXT_REGION 347 891 357 891 50 HELIX 361 891 395 COLOUR_TEXT_REGION 361 891 395 891 50 HELIX 463 891 477 COLOUR_TEXT_REGION 463 891 477 891 50 STRAND 44 896 50 COLOUR_TEXT_REGION 44 896 50 896 51 STRAND 79 896 81 COLOUR_TEXT_REGION 79 896 81 896 51 STRAND 119 896 124 COLOUR_TEXT_REGION 119 896 124 896 51 STRAND 176 896 178 COLOUR_TEXT_REGION 176 896 178 896 51 STRAND 186 896 187 COLOUR_TEXT_REGION 186 896 187 896 51 STRAND 195 896 198 COLOUR_TEXT_REGION 195 896 198 896 51 STRAND 268 896 272 COLOUR_TEXT_REGION 268 896 272 896 51 STRAND 302 896 305 COLOUR_TEXT_REGION 302 896 305 896 51 STRAND 440 896 443 COLOUR_TEXT_REGION 440 896 443 896 51 STRAND 452 896 457 COLOUR_TEXT_REGION 452 896 457 896 51 HELIX 7 896 17 COLOUR_TEXT_REGION 7 896 17 896 50 HELIX 23 896 37 COLOUR_TEXT_REGION 23 896 37 896 50 HELIX 52 896 67 COLOUR_TEXT_REGION 52 896 67 896 50 HELIX 107 896 115 COLOUR_TEXT_REGION 107 896 115 896 50 HELIX 126 896 128 COLOUR_TEXT_REGION 126 896 128 896 50 HELIX 164 896 171 COLOUR_TEXT_REGION 164 896 171 896 50 HELIX 227 896 238 COLOUR_TEXT_REGION 227 896 238 896 50 HELIX 285 896 298 COLOUR_TEXT_REGION 285 896 298 896 50 HELIX 312 896 335 COLOUR_TEXT_REGION 312 896 335 896 50 HELIX 347 896 357 COLOUR_TEXT_REGION 347 896 357 896 50 HELIX 360 896 392 COLOUR_TEXT_REGION 360 896 392 896 50 HELIX 431 896 434 COLOUR_TEXT_REGION 431 896 434 896 50 HELIX 463 896 476 COLOUR_TEXT_REGION 463 896 476 896 50 STRAND 44 897 51 COLOUR_TEXT_REGION 44 897 51 897 51 STRAND 76 897 80 COLOUR_TEXT_REGION 76 897 80 897 51 STRAND 119 897 123 COLOUR_TEXT_REGION 119 897 123 897 51 STRAND 185 897 186 COLOUR_TEXT_REGION 185 897 186 897 51 STRAND 197 897 200 COLOUR_TEXT_REGION 197 897 200 897 51 STRAND 268 897 272 COLOUR_TEXT_REGION 268 897 272 897 51 STRAND 440 897 445 COLOUR_TEXT_REGION 440 897 445 897 51 STRAND 451 897 457 COLOUR_TEXT_REGION 451 897 457 897 51 HELIX 9 897 17 COLOUR_TEXT_REGION 9 897 17 897 50 HELIX 23 897 37 COLOUR_TEXT_REGION 23 897 37 897 50 HELIX 55 897 64 COLOUR_TEXT_REGION 55 897 64 897 50 HELIX 108 897 115 COLOUR_TEXT_REGION 108 897 115 897 50 HELIX 165 897 171 COLOUR_TEXT_REGION 165 897 171 897 50 HELIX 227 897 235 COLOUR_TEXT_REGION 227 897 235 897 50 HELIX 258 897 261 COLOUR_TEXT_REGION 258 897 261 897 50 HELIX 286 897 299 COLOUR_TEXT_REGION 286 897 299 897 50 HELIX 313 897 336 COLOUR_TEXT_REGION 313 897 336 897 50 HELIX 346 897 355 COLOUR_TEXT_REGION 346 897 355 897 50 HELIX 364 897 397 COLOUR_TEXT_REGION 364 897 397 897 50 HELIX 463 897 477 COLOUR_TEXT_REGION 463 897 477 897 50