SILENT_MODE
BLOCK_FILE jp_9eu5yv_.concise.blc
MAX_NSEQ 861
MAX_INPUT_LEN 863
OUTPUT_FILE jp_9eu5yv_.concise.ps
PORTRAIT
POINTSIZE 8
IDENT_WIDTH 12
X_OFFSET 2
Y_OFFSET 2
DEFINE_FONT 0 Helvetica		DEFAULT 
DEFINE_FONT 1 Helvetica		REL		0.75   
DEFINE_FONT 7 Helvetica		REL		0.6
DEFINE_FONT 3 Helvetica-Bold	DEFAULT    
DEFINE_FONT 4 Times-Bold    	DEFAULT   
DEFINE_FONT 5 Helvetica-BoldOblique	DEFAULT 
#
DEFINE_COLOUR 3  1 0.62 0.67	# Turquiose
DEFINE_COLOUR 4  1 1 0		# Yellow
DEFINE_COLOUR 5  1 0 0		# Red
DEFINE_COLOUR 7  1 0 1		# Purple
DEFINE_COLOUR 8  0 0 1		# Blue
DEFINE_COLOUR 9  0 1 0		# Green
DEFINE_COLOUR 10 0.41 0.64 1.00	# Pale blue 
DEFINE_COLOUR 11 0.41 0.82 0.67	# Pale green 
DEFINE_COLOUR 50 0.69 0.18 0.37	# Pink (helix)
DEFINE_COLOUR 51 1.00 0.89 0.00	# Gold (strand)
NUMBER_INT 10
SETUP
#
# Highlight specific residues.
# Avoid highlighting Lupas 'C' predictions by
# limiting the highlighting to the alignments 
Scol_CHARS	C 1 1 101 850   4
Ccol_CHARS	H ALL    5
Ccol_CHARS	P ALL    8
SURROUND_CHARS LIV   ALL
#
# Replace known structure types with whitespace
SUB_CHARS 1 851 101 860 H SPACE
SUB_CHARS 1 851 101 860 E SPACE
SUB_CHARS 1 851 101 860 - SPACE
HELIX 24 854 30
COLOUR_TEXT_REGION 24 854 30 854 50
HELIX 33 854 43
COLOUR_TEXT_REGION 33 854 43 854 50
HELIX 48 854 60
COLOUR_TEXT_REGION 48 854 60 854 50
HELIX 66 854 76
COLOUR_TEXT_REGION 66 854 76 854 50
HELIX 89 854 98
COLOUR_TEXT_REGION 89 854 98 854 50
HELIX 24 859 29
COLOUR_TEXT_REGION 24 859 29 859 50
HELIX 33 859 42
COLOUR_TEXT_REGION 33 859 42 859 50
HELIX 47 859 60
COLOUR_TEXT_REGION 47 859 60 859 50
HELIX 66 859 76
COLOUR_TEXT_REGION 66 859 76 859 50
HELIX 89 859 98
COLOUR_TEXT_REGION 89 859 98 859 50
STRAND 15 860 15
COLOUR_TEXT_REGION 15 860 15 860 51
HELIX 24 860 30
COLOUR_TEXT_REGION 24 860 30 860 50
HELIX 33 860 45
COLOUR_TEXT_REGION 33 860 45 860 50
HELIX 49 860 60
COLOUR_TEXT_REGION 49 860 60 860 50
HELIX 65 860 76
COLOUR_TEXT_REGION 65 860 76 860 50
HELIX 91 860 98
COLOUR_TEXT_REGION 91 860 98 860 50